RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MFN1Q8IWA4 741 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 SAMD3Q8N6K7 520 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 DDI1Q8WTU0 396 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 MS4A14Q96JA4 679 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 PPP1R36Q96LQ0 422 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 FOPNLQ96NB1 174 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 DDIT4Q9NX09 232 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.62□□□□□ -1.51
LRP6-203ENST00000538239 AIPL1Q9NZN9 384 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 LIMA1Q9UHB6 759 aaKnown RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 TRPV2Q9Y5S1 764 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 SLC30A1Q9Y6M5 507 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 NEURL4Q96JN8 1562 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 APRTP07741 180 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CASP7P55210 303 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 SEMA3FQ13275 785 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 TRIM68Q6AZZ1 485 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CYP2W1Q8TAV3 490 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ATP8B4Q8TF62 1192 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 WNK4Q96J92 1243 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 IDI2Q9BXS1 227 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 TRPM5Q9NZQ8 1165 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CAPN7Q9Y6W3 813 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 A0A087WUV0 522 aaPredicted RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 NDUFS3O75489 264 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CAV1Q03135 178 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 NOGQ13253 232 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 MTF1Q14872 753 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 NCAPHQ15003 741 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 EPM2AIP1Q7L775 607 aaPredicted RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 TRIM48Q8IWZ4 208 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ZNF507Q8TCN5 953 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 SCFD1Q8WVM8 642 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ELMO3Q96BJ8 720 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ABCB6Q9NP58 842 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 MLXIPLQ9NP71 852 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CHST12Q9NRB3 414 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 DDX43Q9NXZ2 648 aaKnown RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 DSEQ9UL01 958 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CAMTA1Q9Y6Y1 1673 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ESYT3A0FGR9 886 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 PSMD3O43242 534 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CTIFO43310 598 aaKnown RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 SPAG7O75391 227 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ATP1A1P05023 1023 aaKnown RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 PPP3CCP48454 512 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 LIG3P49916 1009 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 IKBKEQ14164 716 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CD302Q8IX05 232 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 TMEM199Q8N511 208 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 RNPC3Q96LT9 517 aaKnown RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 CBWD1Q9BRT8 395 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CPSF2Q9P2I0 782 aaKnown RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 ZNF212Q9UDV6 495 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 USP20Q9Y2K6 914 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 IPPQ9Y573 584 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 A0A0G2JND7 137 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 SLC12A8A0AV02 714 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ARHGAP10A1A4S6 786 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 MYO1DO94832 1006 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 OAZ1P54368 228 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 EDRF1Q3B7T1 1238 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 COBLL1Q53SF7 1204 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 TREML2Q5T2D2 321 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 TBC1D1Q86TI0 1168 aaPredicted RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 SENP1Q9P0U3 644 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 KANSL3Q9P2N6 904 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 XPO7Q9UIA9 1087 aaKnown RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 PCDHB2Q9Y5E7 798 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 MAPK13O15264 365 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 SYNCRIPO60506 623 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 PPFIA2O75334 1257 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 SGPL1O95470 568 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 PBLDP30039 288 aaPredicted RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 HOXA10P31260 410 aaPredicted RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 RPL10AP62906 217 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 GIT2Q14161 759 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 SEC23AQ15436 765 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 P3H1Q32P28 736 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CCDC144BQ3MJ40 725 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 IQSEC1Q6DN90 963 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ITIH5Q86UX2 942 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CERS5Q8N5B7 392 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 BTBD6Q96KE9 485 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CHP1Q99653 195 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 TINF2Q9BSI4 451 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 APOL5Q9BWW9 433 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ADAM33Q9BZ11 813 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 MFSD1Q9H3U5 465 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 RIOX1Q9H6W3 641 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 SCUBE2Q9NQ36 999 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 INTUQ9ULD6 942 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 OPHN1O60890 802 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 RPLP2P05387 115 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 SLURP2P0DP57 97 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 SP100P23497 879 aaPredicted RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 ACAT1P24752 427 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 C2CD6Q53TS8 623 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 PPM1LQ5SGD2 360 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms