RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 PDIA5Q14554 519 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 FAXCQ5TGI0 409 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 C1orf131Q8NDD1 294 aaKnown RBP11.72□□□□□ -0.53
LINC00346-201ENST00000538077 KLF6Q99612 283 aaPredicted RBP11.72□□□□□ -0.53
LINC00346-201ENST00000538077 LRRC1Q9BTT6 524 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 STK33Q9BYT3 514 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 SCUBE2Q9NQ36 999 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 ZC3H7BQ9UGR2 993 aaKnown RBP11.72□□□□□ -0.53
LINC00346-201ENST00000538077 ANGPT2O15123 496 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 CASP4P49662 377 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 GALCP54803 685 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 SGMS1Q86VZ5 419 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 ARHGEF26Q96DR7 871 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 MAP3K13O43283 966 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 SKIP12755 728 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 MYL4P12829 197 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 CACUL1Q86Y37 369 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 VMP1Q96GC9 406 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 TIPINQ9BVW5 301 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 MTMR12Q9C0I1 747 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 ADNPQ9H2P0 1102 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 DCDC2CA8MYV0 355 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 M0QYT0 321 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 RHOBTB1O94844 696 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 SLC1A1P43005 524 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 TAF6P49848 677 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 RCAN1P53805 252 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 EXOSC10Q01780 885 aaKnown RBP11.71□□□□□ -0.53
LINC00346-201ENST00000538077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00346-201ENST00000538077 ST13P4Q8IZP2 240 aaPredicted RBP11.71□□□□□ -0.53
LINC00346-201ENST00000538077 BLOC1S5Q8TDH9 187 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 LRRC37BQ96QE4 947 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 POP1Q99575 1024 aaKnown RBP11.71□□□□□ -0.53
LINC00346-201ENST00000538077 COLEC11Q9BWP8 271 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 GOLPH3Q9H4A6 298 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 SYTL2Q9HCH5 934 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 AAASQ9NRG9 546 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 CACNA2D2Q9NY47 1150 aa11.71□□□□□ -0.53
LINC00346-201ENST00000538077 PPLO60437 1756 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 DDNO94850 711 aaPredicted RBP11.71□□□□□ -0.54
LINC00346-201ENST00000538077 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.54
LINC00346-201ENST00000538077 ACOT1Q86TX2 421 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 SHCBP1Q8NEM2 672 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 SCFD2Q8WU76 684 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 FAM162AQ96A26 154 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 GBA2Q9HCG7 927 aaPredicted RBP11.71□□□□□ -0.54
LINC00346-201ENST00000538077 C6orf10Q5SRN2 563 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 C16orf87Q6PH81 154 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 TRABDQ9H4I3 376 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 WDCPQ9H6R7 721 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 ADARB2Q9NS39 739 aaKnown RBP11.71□□□□□ -0.54
LINC00346-201ENST00000538077 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.71□□□□□ -0.54
LINC00346-201ENST00000538077 MYO5BQ9ULV0 1848 aa11.71□□□□□ -0.54
LINC00346-201ENST00000538077 PMPCBO75439 489 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 AP1G2O75843 785 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 MIER2Q8N344 545 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 SCFD1Q8WVM8 642 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 NMRK2Q9NPI5 230 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC00346-201ENST00000538077 TCP11X1B4DZS4 312 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 GPR182O15218 404 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 NDUFB5O43674 189 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 ASS1P00966 412 aaKnown RBP11.7□□□□□ -0.54
LINC00346-201ENST00000538077 POMCP01189 267 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 MYL2P10916 166 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 RALBP11234 206 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 SBK1Q52WX2 424 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 NBPF12Q5TAG4 269 aaPredicted RBP11.7□□□□□ -0.54
LINC00346-201ENST00000538077 NFKBIZQ9BYH8 718 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 ACTR5Q9H9F9 607 aaPredicted RBP11.7□□□□□ -0.54
LINC00346-201ENST00000538077 STARD7Q9NQZ5 370 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 CRLS1Q9UJA2 301 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 TBX20Q9UMR3 447 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 ADGRG1Q9Y653 693 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 CNTNAP5Q8WYK1 1306 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 KIF20BQ96Q89 1820 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 HSPA1AP0DMV8 641 aaKnown RBP11.7□□□□□ -0.54
LINC00346-201ENST00000538077 HSPA1BP0DMV9 641 aaKnown RBP11.7□□□□□ -0.54
LINC00346-201ENST00000538077 CKBP12277 381 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 UCHL3P15374 230 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 PWP1Q13610 501 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 NBPF20Q3BBV1 942 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 OR2W6PQ8NHA6 318 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 ATL2Q8NHH9 583 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 SPATA18Q8TC71 538 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 GTF3C2Q8WUA4 911 aaPredicted RBP11.7□□□□□ -0.54
LINC00346-201ENST00000538077 FBXO32Q969P5 355 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 C7orf25Q9BPX7 421 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 ARHGAP26Q9UNA1 814 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.7□□□□□ -0.54
LINC00346-201ENST00000538077 CYB561D2O14569 222 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 MSH4O15457 936 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 ATP8B1O43520 1251 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 CAPZA2P47755 286 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 CARSP49589 748 aaKnown RBP11.7□□□□□ -0.54
LINC00346-201ENST00000538077 GUCY1A3Q02108 690 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 STK4Q13043 487 aa11.7□□□□□ -0.54
LINC00346-201ENST00000538077 ZNF177Q13360 481 aaPredicted RBP11.7□□□□□ -0.54
LINC00346-201ENST00000538077 MAP1SQ66K74 1059 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms