RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 SPOUT1Q5T280 376 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 EPS8L1Q8TE68 723 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 JAKMIP2Q96AA8 810 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 FAM81BQ96LP2 452 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 ZBED2Q9BTP6 218 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 GPR62Q9BZJ7 368 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 NHEJ1Q9H9Q4 299 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 NOCTQ9UK39 431 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 TNRC18O15417 2968 aaPredicted RBP16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 CEP290O15078 2479 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 TMEM189-UBE2V1I3L0A0 370 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 TADA2AO75478 443 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 PDGFRBP09619 1106 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 LINC00271P0C7V0 271 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 MYOGP15173 224 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 CYP11B1P15538 503 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 CHRNB2P17787 502 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 ACAT1P24752 427 aaKnown RBP16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 PRKCIP41743 596 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 CYP26C1Q6V0L0 522 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 DNAAF5Q86Y56 855 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 TOP6BLQ8N6T0 577 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 SLC4A11Q8NBS3 891 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 OR6B3Q8NGW1 331 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 TFAP2BQ92481 460 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 FAXDC2Q96IV6 333 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 SUSD3Q96L08 255 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 RNPC3Q96LT9 517 aaKnown RBP16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 SLC9A7Q96T83 725 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 TMEM175Q9BSA9 504 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 SYT11Q9BT88 431 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 VN1R3Q9BXE9 311 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 SPTLC3Q9NUV7 552 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 ADAM28Q9UKQ2 775 aa16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 BARX2Q9UMQ3 279 aaPredicted RBP16.71■□□□□ 0.27
SFSWAP-206ENST00000537582 TSC2P49815 1807 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 M0QZQ0 153 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 TACC1O75410 805 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 ARHGEF15O94989 841 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 BRD2P25440 801 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 TKTP29401 623 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 KIAA0319Q5VV43 1072 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 KCNT2Q6UVM3 1135 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 TOGARAM2Q6ZUX3 1019 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 TAS1R1Q7RTX1 841 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 SPRED2Q7Z698 418 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 ACOT1Q86TX2 421 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 PALB2Q86YC2 1186 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 LNX1Q8TBB1 728 aaPredicted RBP16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 DDX1Q92499 740 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 RTP3Q9BQQ7 232 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 DESI2Q9BSY9 194 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 COLEC11Q9BWP8 271 aa16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 PUF60Q9UHX1 559 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-206ENST00000537582 TLL1O43897 1013 aa16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 ATP2C2O75185 946 aa16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 MMEP08473 750 aa16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 ODC1P11926 461 aa16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 WARSP23381 471 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 PSMC1P62191 440 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 YWHAEP62258 255 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 CDK17Q00537 523 aa16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 ASTE1Q2TB18 679 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 TMTC1Q8IUR5 882 aa16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 C12orf29Q8N999 325 aa16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 COLGALT1Q8NBJ5 622 aa16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 SNX25Q9H3E2 840 aa16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 RRAGDQ9NQL2 400 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-206ENST00000537582 A8MXQ7 604 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 DDX3XO00571 662 aaKnown RBP eCLIP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 GABRDO14764 452 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 ZNF263O14978 683 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 CAPN15O75808 1086 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 GNA15P30679 374 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 GNL1P36915 607 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 ALDH7A1P49419 539 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 GFPT1Q06210 699 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 FAM171A1Q5VUB5 890 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 FUT10Q6P4F1 479 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 DPH6Q7L8W6 267 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 GLYCTKQ8IVS8 523 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 CCDC112Q8NEF3 446 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 PHOSPHO2Q8TCD6 241 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 TRIM44Q96DX7 344 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 TMEM176AQ96HP8 235 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 ZNF558Q96NG5 402 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 PCDHB18PQ96TA0 734 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 RAD9AQ99638 391 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 GDF15Q99988 308 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 UBE2OQ9C0C9 1292 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 DDX43Q9NXZ2 648 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 PCDHB8Q9UN66 801 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 STXBP5LQ9Y2K9 1186 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 INSL6Q9Y581 213 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 KIAA1671Q9BY89 1806 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 A0A087X0T9 212 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 A0A0U1RQJ8 604 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 THAP12O43422 761 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms