RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 SGK1O00141 431 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 TRIM66O15016 1216 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 TBX3O15119 743 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 BRINP1O60477 761 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 CYP3A4P08684 503 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 CALM1P0DP23 149 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 CALM2P0DP24 149 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 CALM3P0DP25 149 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 ANTXR2P58335 489 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 BNC1Q01954 994 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 MBTD1Q05BQ5 628 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 MRPL58Q14197 206 aaKnown RBP10.49□□□□□ -0.73
CPSF7-217ENST00000537162 RTP5Q14D33 572 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 C6orf118Q5T5N4 469 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 KIAA1614Q5VZ46 1190 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 JAKMIP3Q5VZ66 844 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 TPGS2Q68CL5 300 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 LMBRD2Q68DH5 695 aaPredicted RBP10.49□□□□□ -0.73
CPSF7-217ENST00000537162 DBX2Q6ZNG2 339 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 RABEPKQ7Z6M1 372 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 RAB11FIP4Q86YS3 637 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 HACE1Q8IYU2 909 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 ZNF654Q8IZM8 581 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 ALLCQ8N6M5 410 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 EXD3Q8N9H8 876 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 TRIML1Q8N9V2 468 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 CTCFLQ8NI51 663 aaPredicted RBP10.49□□□□□ -0.73
CPSF7-217ENST00000537162 PSPC1Q8WXF1 523 aaKnown RBP10.49□□□□□ -0.73
CPSF7-217ENST00000537162 TSC1Q92574 1164 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 HSPA12BQ96MM6 686 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 TM7SF3Q9NS93 570 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 BCCIPQ9P287 314 aaKnown RBP eCLIP10.49□□□□□ -0.73
CPSF7-217ENST00000537162 AFF4Q9UHB7 1163 aaKnown RBP10.49□□□□□ -0.73
CPSF7-217ENST00000537162 TMEM131Q92545 1883 aa10.49□□□□□ -0.73
CPSF7-217ENST00000537162 DENND4CQ5VZ89 1909 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 ZNF638Q14966 1978 aaKnown RBP10.48□□□□□ -0.73
CPSF7-217ENST00000537162 AHCTF1Q8WYP5 2266 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 CLEC18AA5D8T8 446 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 INO80B-WBP1J3KQ70 363 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 CILPO75339 1184 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 SOAT2O75908 522 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 GABRR2P28476 465 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 WEE1P30291 646 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 ADCY7P51828 1080 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 TMPRSS3P57727 454 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 SCRN1Q12765 414 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 GLRA4Q5JXX5 417 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 SLC27A1Q6PCB7 646 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 CLEC18BQ6UXF7 455 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 FERMT3Q86UX7 667 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 TMPRSS12Q86WS5 348 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 CLEC18CQ8NCF0 446 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 IGDCC4Q8TDY8 1250 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 CDC6Q99741 560 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 TASP1Q9H6P5 420 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 GAREM1Q9H706 876 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 ECT2Q9H8V3 914 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 GMIPQ9P107 970 aa10.48□□□□□ -0.73
CPSF7-217ENST00000537162 OBSL1O75147 1896 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 TTLL13PA6NNM8 815 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 MSH4O15457 936 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 EDIL3O43854 480 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 RECQL4O94761 1208 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 ALDH1A2O94788 518 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 KLF8O95600 359 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-217ENST00000537162 AFPP02771 609 aaKnown RBP10.47□□□□□ -0.73
CPSF7-217ENST00000537162 OR4Q2P0C623 313 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 NAPAP54920 295 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 PTENP60484 403 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 SETQ01105 290 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-217ENST00000537162 MESP2Q0VG99 397 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 TARDBPQ13148 414 aaKnown RBP eCLIP10.47□□□□□ -0.73
CPSF7-217ENST00000537162 UPP1Q16831 310 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 CTXN3Q4LDR2 81 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 EMC10Q5UCC4 262 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 USP49Q70CQ1 688 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 PGBD3Q8N328 593 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 TTC9BQ8N6N2 239 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 TXNDC5Q8NBS9 432 aaKnown RBP10.47□□□□□ -0.73
CPSF7-217ENST00000537162 SLC7A3Q8WY07 619 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 USP13Q92995 863 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-217ENST00000537162 PGLYRP2Q96PD5 576 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 LGMNQ99538 433 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 MAP3K14Q99558 947 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 LZTS2Q9BRK4 669 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.47□□□□□ -0.73
CPSF7-217ENST00000537162 DHX33Q9H6R0 707 aaKnown RBP10.47□□□□□ -0.73
CPSF7-217ENST00000537162 CD93Q9NPY3 652 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 CABIN1Q9Y6J0 2220 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 BSNQ9UPA5 3926 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 FBN3Q75N90 2809 aa10.47□□□□□ -0.73
CPSF7-217ENST00000537162 IGHV1OR15-9A0A0B4J2B8 117 aa10.46□□□□□ -0.73
CPSF7-217ENST00000537162 A0A1B0GUA9 196 aa10.46□□□□□ -0.73
CPSF7-217ENST00000537162 TCRBV21S2A2A0A5A6 115 aa10.46□□□□□ -0.73
CPSF7-217ENST00000537162 ERICH2A1L162 156 aa10.46□□□□□ -0.73
CPSF7-217ENST00000537162 BLACEA4D250 179 aa10.46□□□□□ -0.73
CPSF7-217ENST00000537162 SMCO2A6NFE2 343 aa10.46□□□□□ -0.73
CPSF7-217ENST00000537162 SUV39H1O43463 412 aa10.46□□□□□ -0.73
CPSF7-217ENST00000537162 TNFSF14O43557 240 aa10.46□□□□□ -0.73
CPSF7-217ENST00000537162 ADAM23O75077 832 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms