RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TMEM132DQ14C87 1099 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 ACAP1Q15027 740 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 PPP1R7Q15435 360 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 MAP1SQ66K74 1059 aaPredicted RBP14.39□□□□□ -0.11
SMG6-203ENST00000536871 DCUN1D2Q6PH85 259 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 POLNQ7Z5Q5 900 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 ADAT2Q7Z6V5 191 aaKnown RBP14.39□□□□□ -0.11
SMG6-203ENST00000536871 PASD1Q8IV76 773 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 ATL2Q8NHH9 583 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 SCLT1Q96NL6 688 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 CAPS2Q9BXY5 557 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 TXLNGYQ9BZA5 131 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 PABPC3Q9H361 631 aaKnown RBP14.39□□□□□ -0.11
SMG6-203ENST00000536871 MINDY3Q9H8M7 445 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 ZSWIM8A7E2V4 1837 aa14.39□□□□□ -0.11
SMG6-203ENST00000536871 LACTBL1A8MY62 500 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 KRT14P02533 472 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 KRT19P08727 400 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 ARF4P18085 180 aaPredicted RBP14.38□□□□□ -0.11
SMG6-203ENST00000536871 GRM5P41594 1212 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 ZSCAN26Q16670 478 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 ODF2Q5BJF6 829 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 C1orf127Q8N9H9 656 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 ELMO3Q96BJ8 720 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 FAM84AQ96KN4 292 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 FRMD8P1Q9BZ68 369 aaPredicted RBP14.38□□□□□ -0.11
SMG6-203ENST00000536871 GCOM2Q9BZD3 368 aaPredicted RBP14.38□□□□□ -0.11
SMG6-203ENST00000536871 FOXP3Q9BZS1 431 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 NEUROG2Q9H2A3 272 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 EFR3BQ9Y2G0 817 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 ZNFX1Q9P2E3 1918 aaKnown RBP14.38□□□□□ -0.11
SMG6-203ENST00000536871 PLXNB2O15031 1838 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 TCRBV5S1A1TA0A578 114 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 ERICH4A6NGS2 130 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 H0YGN5 161 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 TJP3O95049 919 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 HMGCRP04035 888 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 WEE2P0C1S8 567 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 SMPD1P17405 629 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 BRD2P25440 801 aaKnown RBP14.38□□□□□ -0.11
SMG6-203ENST00000536871 AXLP30530 894 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 PMS2P54278 862 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 PLTPP55058 493 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 MYO1EQ12965 1108 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 PTK6Q13882 451 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 WDR72Q3MJ13 1102 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 TTMPQ5BVD1 217 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 JADE1Q6IE81 842 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 AADACL2Q6P093 401 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 DRICH1Q6PGQ1 229 aaPredicted RBP14.38□□□□□ -0.11
SMG6-203ENST00000536871 CCDC50Q8IVM0 306 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 PLCD3Q8N3E9 789 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 CCDC89Q8N998 374 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 ART4Q93070 314 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 OSBPL8Q9BZF1 889 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 STMN4Q9H169 189 aaPredicted RBP14.38□□□□□ -0.11
SMG6-203ENST00000536871 SNX24Q9Y343 169 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 Q9Y3F1 56 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 NFS1Q9Y697 457 aa14.38□□□□□ -0.11
SMG6-203ENST00000536871 SMIM35A0A1B0GVV1 85 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 A6NJR5 290 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 SIGLEC16A6NMB1 481 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 TSPAN1O60635 241 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 GJB1P08034 283 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 IQCF3P0C7M6 154 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 ZNF286BP0CG31 522 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 VDRP11473 427 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 RARGP13631 454 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 SNX16P57768 344 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 OSTNP61366 133 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 IFFO1Q0D2I5 559 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 KLF1Q13351 362 aaPredicted RBP14.37□□□□□ -0.11
SMG6-203ENST00000536871 ZNF268Q14587 947 aaPredicted RBP14.37□□□□□ -0.11
SMG6-203ENST00000536871 UAP1Q16222 522 aaPredicted RBP14.37□□□□□ -0.11
SMG6-203ENST00000536871 PPP1R15BQ5SWA1 713 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 DENND2CQ68D51 928 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 TTC27Q6P3X3 843 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 TRMT10CQ7L0Y3 403 aaKnown RBP14.37□□□□□ -0.11
SMG6-203ENST00000536871 ARL8AQ96BM9 186 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 TRIM31Q9BZY9 425 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 DCLK3Q9C098 648 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 GRHL1Q9NZI5 618 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 NXF1Q9UBU9 619 aaKnown RBP14.37□□□□□ -0.11
SMG6-203ENST00000536871 SIX4Q9UIU6 781 aa14.37□□□□□ -0.11
SMG6-203ENST00000536871 PLXNA1Q9UIW2 1896 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 CILPO75339 1184 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 ITGB3P05106 788 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 NFICP08651 508 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 KRT7P08729 469 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 CD19P15391 556 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 NR1D1P20393 614 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 PTPN11Q06124 597 aaPredicted RBP14.36□□□□□ -0.11
SMG6-203ENST00000536871 ZNF844Q08AG5 666 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 INCA1Q0VD86 236 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 CNGA2Q16280 664 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 HADHQ16836 314 aaKnown RBP14.36□□□□□ -0.11
SMG6-203ENST00000536871 SLC10A6Q3KNW5 377 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 TMEM63BQ5T3F8 832 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 ZDHHC24Q6UX98 284 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 KIAA0319LQ8IZA0 1049 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms