RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 NUDT17P0C025 328 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 TMEM253P0C7T8 217 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 GAP43P17677 238 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 RFX1P22670 979 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 CYP3A7P24462 503 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 ZNF76P36508 570 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 SREBF1P36956 1147 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 DHX9Q08211 1270 aaKnown RBP12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 AP3B2Q13367 1082 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 XRCC4Q13426 336 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 UAP1Q16222 522 aaPredicted RBP12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 NFIL3Q16649 462 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 BMT2Q1RMZ1 405 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 AAK1Q2M2I8 961 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 DAAM2Q86T65 1068 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 RSPH3Q86UC2 560 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 CCDC197Q8NCU1 140 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 HAS1Q92839 578 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 APBB2Q92870 758 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 HLA-CQ95604 372 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 TLCD1Q96CP7 247 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 FAM49AQ9H0Q0 323 aaPredicted RBP12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 AZI2Q9H6S1 392 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 PACSIN2Q9UNF0 486 aaPredicted RBP12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 DNM3Q9UQ16 869 aa12.35□□□□□ -0.43
CHRNB1-202ENST00000536404 MUC3AQ02505 3323 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 CFAP73A6NFT4 308 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 RRN3P2A6NIE6 340 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 DDX39AO00148 427 aaKnown RBP12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 ENPP3O14638 875 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 ABLIM1O14639 778 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 CCNE2O96020 404 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 PON1P27169 355 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 STAT5BP51692 787 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 JAM2P57087 298 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 RNASE9P60153 205 aaKnown RBP12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 PTENP60484 403 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 SFSWAPQ12872 951 aaKnown RBP12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 LAMB3Q13751 1172 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 EPC2Q52LR7 807 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 FBXO47Q5MNV8 452 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 C6orf118Q5T5N4 469 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 CWF19L1Q69YN2 538 aaKnown RBP12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 STXBP4Q6ZWJ1 553 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 PLPPR4Q7Z2D5 763 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 SPATA21Q7Z572 469 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 NT5DC3Q86UY8 548 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 CTNNBL1Q8WYA6 563 aaPredicted RBP12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 RFFLQ8WZ73 363 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 RAPGEF5Q92565 580 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 MBOAT7Q96N66 472 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 MKNK1Q9BUB5 465 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 AGO3Q9H9G7 860 aaKnown RBP12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 MTRF1LQ9UGC7 380 aaKnown RBP12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 MYH10P35580 1976 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 UBE4BO95155 1302 aa12.34□□□□□ -0.43
CHRNB1-202ENST00000536404 EME2A4GXA9 379 aaPredicted RBP12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 MIF4GDA9UHW6 222 aaKnown RBP12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 FAM86B1E9PN63 330 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 PODXLO00592 558 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 DAPK3O43293 454 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 ATG7O95352 703 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 AGTP01019 485 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 FAM86B2P0C5J1 330 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 CD52P31358 61 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 SLC12A3P55017 1021 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 MAGOHP61326 146 aaKnown RBP12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 MRPS6P82932 125 aaKnown RBP12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 LMNB2Q03252 620 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 TMEM62Q0P6H9 643 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 EPHA7Q15375 998 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 ENOX2Q16206 610 aaKnown RBP12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 ERMARDQ5T6L9 678 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 DENND2CQ68D51 928 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 TMEM192Q8IY95 271 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 SYT2Q8N9I0 419 aaPredicted RBP12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 NEK9Q8TD19 979 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 MAGOHBQ96A72 148 aaKnown RBP12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 XPO6Q96QU8 1125 aaKnown RBP12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 TMEM109Q9BVC6 243 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 AP1M1Q9BXS5 423 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 DDX47Q9H0S4 455 aaKnown RBP12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 EBF2Q9HAK2 575 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 SAMD15Q9P1V8 674 aa12.33□□□□□ -0.43
CHRNB1-202ENST00000536404 MYO7AQ13402 2215 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 E9PMD0 336 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 EIF3DO15371 548 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 DHX15O43143 795 aaKnown RBP12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 TBCAO75347 108 aaKnown RBP12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 DR1Q01658 176 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 GPM6BQ13491 265 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 MIS18BP1Q6P0N0 1132 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 ABHD15Q6UXT9 468 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 TSHZ1Q6ZSZ6 1077 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 EPM2AIP1Q7L775 607 aaPredicted RBP12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 TAOK1Q7L7X3 1001 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms