RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 METTL23Q86XA0 190 aa15.37■□□□□ 0.05
UBE3B-206ENST00000536398 C12orf56Q8IXR9 622 aa15.37■□□□□ 0.05
UBE3B-206ENST00000536398 FMR1NBQ8N0W7 255 aaPredicted RBP15.37■□□□□ 0.05
UBE3B-206ENST00000536398 SLC44A3Q8N4M1 653 aa15.37■□□□□ 0.05
UBE3B-206ENST00000536398 ZNF516Q92618 1163 aa15.37■□□□□ 0.05
UBE3B-206ENST00000536398 ANKRD36BP1Q96IX9 119 aa15.37■□□□□ 0.05
UBE3B-206ENST00000536398 OXCT2Q9BYC2 517 aaPredicted RBP15.37■□□□□ 0.05
UBE3B-206ENST00000536398 DMAC2Q9NW81 257 aa15.37■□□□□ 0.05
UBE3B-206ENST00000536398 IGSF9Q9P2J2 1179 aa15.37■□□□□ 0.05
UBE3B-206ENST00000536398 DSEQ9UL01 958 aa15.37■□□□□ 0.05
UBE3B-206ENST00000536398 MRPS23Q9Y3D9 190 aaKnown RBP15.37■□□□□ 0.05
UBE3B-206ENST00000536398 YIPF1Q9Y548 306 aa15.37■□□□□ 0.05
UBE3B-206ENST00000536398 EXOC3O60645 756 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 CST3P01034 146 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-206ENST00000536398 MYL1P05976 194 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 GJA1P17302 382 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 CEBPBP17676 345 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 PNPLA4P41247 253 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 SNW1Q13573 536 aaKnown RBP15.36■□□□□ 0.05
UBE3B-206ENST00000536398 TRAPPC11Q7Z392 1133 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 OSTM1Q86WC4 334 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 WDR49Q8IV35 697 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 NPAS3Q8IXF0 933 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 LRRC52Q8N7C0 313 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 FGF14Q92915 247 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 MCRS1Q96EZ8 462 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 MFSD14AQ96MC6 490 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 DNAJC25Q9H1X3 360 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 TMLHEQ9NVH6 421 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 MAPK8IP1Q9UQF2 711 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 SNX9Q9Y5X1 595 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 NUMBLQ9Y6R0 609 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 WDFY4Q6ZS81 3184 aa15.36■□□□□ 0.05
UBE3B-206ENST00000536398 MOSPD3O75425 235 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 RHOBTB3O94955 611 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 TNNC2P02585 160 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 TNNI1P19237 187 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 ACAT1P24752 427 aaKnown RBP15.35■□□□□ 0.05
UBE3B-206ENST00000536398 VCPP55072 806 aaKnown RBP15.35■□□□□ 0.05
UBE3B-206ENST00000536398 PNOCQ13519 176 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 SURF1Q15526 300 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 CCDC142Q17RM4 750 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 IER5LQ5T953 404 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 THEM5Q8N1Q8 247 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 ENGASEQ8NFI3 743 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 ERCC4Q92889 916 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-206ENST00000536398 HPDLQ96IR7 371 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 ZNF512Q96ME7 567 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-206ENST00000536398 ZSWIM3Q96MP5 696 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 FNBP1Q96RU3 617 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 CGRRF1Q99675 332 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 AVENQ9NQS1 362 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-206ENST00000536398 GDAP2Q9NXN4 497 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 CGNQ9P2M7 1197 aaKnown RBP15.35■□□□□ 0.05
UBE3B-206ENST00000536398 MAFFQ9ULX9 164 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 DUSP12Q9UNI6 340 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 TSC2P49815 1807 aa15.35■□□□□ 0.05
UBE3B-206ENST00000536398 HUS1O60921 280 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 NR3C1P04150 777 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 CFHP08603 1231 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 MYL4P12829 197 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 SOWAHAQ2M3V2 549 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 PDZD4Q76G19 769 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-206ENST00000536398 ELMOD1Q8N336 334 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 FBXL6Q8N531 539 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 ELMO3Q96BJ8 720 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 KXD1Q9BQD3 176 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 LPIN3Q9BQK8 851 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 LRRC3Q9BY71 257 aa15.34■□□□□ 0.05
UBE3B-206ENST00000536398 DDX43Q9NXZ2 648 aaKnown RBP15.34■□□□□ 0.05
UBE3B-206ENST00000536398 ZFP37Q9Y6Q3 630 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-206ENST00000536398 GOLGA6L4A6NEF3 574 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 PDXKO00764 312 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 GPR15P49685 360 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 DLG4P78352 724 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 MGAT5BQ3V5L5 792 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 IQCEQ6IPM2 695 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 LIMS2Q7Z4I7 341 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 SMYD4Q8IYR2 804 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-206ENST00000536398 TOP6BLQ8N6T0 577 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 GOLGA5Q8TBA6 731 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 GPR152Q8TDT2 470 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 NXPE3Q969Y0 559 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 SEPT5Q99719 369 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-206ENST00000536398 PLA2G2FQ9BZM2 168 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 ZNF334Q9HCZ1 680 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-206ENST00000536398 ABI2Q9NYB9 513 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-206ENST00000536398 HCN4Q9Y3Q4 1203 aa15.33■□□□□ 0.04
UBE3B-206ENST00000536398 LRRIQ3A6PVS8 624 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-206ENST00000536398 GABRDO14764 452 aa15.32■□□□□ 0.04
UBE3B-206ENST00000536398 ATP2C2O75185 946 aa15.32■□□□□ 0.04
UBE3B-206ENST00000536398 GADD45BO75293 160 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-206ENST00000536398 NPR3P17342 541 aa15.32■□□□□ 0.04
UBE3B-206ENST00000536398 ATF6P18850 670 aa15.32■□□□□ 0.04
UBE3B-206ENST00000536398 LMO2P25791 158 aa15.32■□□□□ 0.04
UBE3B-206ENST00000536398 ALDH1A3P47895 512 aa15.32■□□□□ 0.04
UBE3B-206ENST00000536398 EPHB3P54753 998 aa15.32■□□□□ 0.04
UBE3B-206ENST00000536398 EPHA5P54756 1037 aa15.32■□□□□ 0.04
UBE3B-206ENST00000536398 MYL6P60660 151 aa15.32■□□□□ 0.04
UBE3B-206ENST00000536398 GPC5P78333 572 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms