RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 DCAF17Q5H9S7 520 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 CBWD3Q5JTY5 395 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 CBWD5Q5RIA9 395 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SPOPLQ6IQ16 392 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TMC5Q6UXY8 1006 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 LRRTM3Q86VH5 581 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 IRF2BP1Q8IU81 584 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ADGRF2Q8IZF7 708 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TOP6BLQ8N6T0 577 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TAS1R2Q8TE23 839 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 HDAC7Q8WUI4 952 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SEMA4DQ92854 862 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ZNF707Q96C28 371 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 PI4K2AQ9BTU6 479 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SRRTQ9BXP5 876 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ZCWPW1Q9H0M4 648 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SDCBP2Q9H190 292 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ADAM7Q9H2U9 754 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 CRISPLD1Q9H336 500 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 PLEKHA4Q9H4M7 779 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 SFXN1Q9H9B4 322 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 TMEM8AQ9HCN3 771 aa12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 ARMCX3Q9UH62 379 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF1A-208ENST00000536194 C5orf42Q9H799 3197 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 CCDC195A0A1B0GUA6 201 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ARHGEF37A1IGU5 675 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 MTMR11A4FU01 709 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 OR6C75A6NL08 312 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 HUS1O60921 280 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ZMYND10O75800 440 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ASS1P00966 412 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 C8AP07357 584 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ATF2P15336 505 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ACAT1P24752 427 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ATICP31939 592 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 GTF2H1P32780 548 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 PIK3CAP42336 1068 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 MARSP56192 900 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ITIH3Q06033 890 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ADCY1Q08828 1119 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 GPR17Q13304 367 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ZNF699Q32M78 642 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 TJAP1Q5JTD0 557 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 TCERG1LQ5VWI1 586 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 TPGS2Q68CL5 300 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 CAVIN1Q6NZI2 390 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 C11orf57Q6ZUT1 292 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 DPH6Q7L8W6 267 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 FRMD5Q7Z6J6 570 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 GPR149Q86SP6 731 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 METTL23Q86XA0 190 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 TTC9BQ8N6N2 239 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 SLC7A14Q8TBB6 771 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 SYAP1Q96A49 352 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 PGLYRP2Q96PD5 576 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 PKMYT1Q99640 499 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 MRPL45Q9BRJ2 306 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 OXCT2Q9BYC2 517 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 SMYD3Q9H7B4 428 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 APOBEC3GQ9HC16 384 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.14□□□□□ -0.473e-10■■■■■ 130.4
TNFRSF1A-208ENST00000536194 TMLHEQ9NVH6 421 aa12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 NXF1Q9UBU9 619 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 R3HCC1Q9Y3T6 440 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-208ENST00000536194 WARSP23381 471 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 LMO2P25791 158 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ERCC5P28715 1186 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 RAP1GAPP47736 663 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 MXI1P50539 228 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 CDH8P55286 799 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 CCDC40Q4G0X9 1142 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 KRT39Q6A163 491 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 TRIM59Q8IWR1 403 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 TMEM86AQ8N2M4 240 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ATAD1Q8NBU5 361 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 CMASQ8NFW8 434 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 SPATA18Q8TC71 538 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 NECAB3Q96P71 396 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 MMS19Q96T76 1030 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 POMKQ9H5K3 350 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 METTL14Q9HCE5 456 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ZDHHC7Q9NXF8 308 aa12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 DDX43Q9NXZ2 648 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 AFF4Q9UHB7 1163 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-208ENST00000536194 DOCK8Q8NF50 2099 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 GREB1Q4ZG55 1949 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 CCL16O15467 120 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ATP2C2O75185 946 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 TACC1O75410 805 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 HOXA9P31269 272 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ASPAP45381 313 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 LHX1P48742 406 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 TNNC1P63316 161 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 NOP14P78316 857 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 CBX2Q14781 532 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 SGSM1Q2NKQ1 1148 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 KLHL40Q2TBA0 621 aa12.12□□□□□ -0.47
TNFRSF1A-208ENST00000536194 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms