RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 RABGGTAQ92696 567 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 MTMR12Q9C0I1 747 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 SMOC2Q9H3U7 446 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 DCHS1Q96JQ0 3298 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 ARHGEF37A1IGU5 675 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 LRRIQ3A6PVS8 624 aaPredicted RBP13.65□□□□□ -0.22
DDB1-207ENST00000535967 H0Y858 1186 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 IKBKBO14920 756 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 GFRA3O60609 400 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
DDB1-207ENST00000535967 FGFR1OPO95684 399 aaKnown RBP13.65□□□□□ -0.22
DDB1-207ENST00000535967 ERCC5P28715 1186 aaPredicted RBP13.65□□□□□ -0.22
DDB1-207ENST00000535967 TAF6P49848 677 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 VAMP7P51809 220 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 GUCY2FP51841 1108 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 DSG1Q02413 1049 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 STX1AQ16623 288 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 SPNS2Q8IVW8 549 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 CSGALNACT2Q8N6G5 542 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 C1orf127Q8N9H9 656 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 CCDC127Q96BQ5 260 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 SUSD3Q96L08 255 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 CDCA3Q99618 268 aaPredicted RBP13.65□□□□□ -0.22
DDB1-207ENST00000535967 DUSP9Q99956 384 aaKnown RBP13.65□□□□□ -0.22
DDB1-207ENST00000535967 GPR62Q9BZJ7 368 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 GZF1Q9H116 711 aaPredicted RBP13.65□□□□□ -0.22
DDB1-207ENST00000535967 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDB1-207ENST00000535967 MRPL17Q9NRX2 175 aaKnown RBP13.65□□□□□ -0.22
DDB1-207ENST00000535967 CHST7Q9NS84 486 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 ANO10Q9NW15 660 aa13.65□□□□□ -0.22
DDB1-207ENST00000535967 SYN3O14994 580 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 STX10O60499 249 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 GNA14O95837 355 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 ITGB3P05106 788 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 FGFR3P22607 806 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 PTPN14Q15678 1187 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 SV2CQ496J9 727 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 LMBRD2Q68DH5 695 aaPredicted RBP13.64□□□□□ -0.23
DDB1-207ENST00000535967 CD300LGQ6UXG3 332 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 FILIP1Q7Z7B0 1213 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 OR5B17Q8NGF7 314 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 PLEKHO2Q8TD55 490 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 PRRX2Q99811 253 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 TTPALQ9BTX7 342 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 METTL14Q9HCE5 456 aaKnown RBP13.64□□□□□ -0.23
DDB1-207ENST00000535967 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
DDB1-207ENST00000535967 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
DDB1-207ENST00000535967 M0QZQ0 153 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 WEE2P0C1S8 567 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 POLR2BP30876 1174 aaKnown RBP13.64□□□□□ -0.23
DDB1-207ENST00000535967 BRCC3P46736 316 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 MARSP56192 900 aaKnown RBP13.64□□□□□ -0.23
DDB1-207ENST00000535967 STX17P56962 302 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 RBP5P82980 135 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 PROX2Q3B8N5 592 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 FAM171A1Q5VUB5 890 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 KIAA1841Q6NSI8 718 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 TRAPPC11Q7Z392 1133 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 FRMD5Q7Z6J6 570 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 MRPL43Q8N983 215 aaKnown RBP13.64□□□□□ -0.23
DDB1-207ENST00000535967 KREMEN2Q8NCW0 462 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 CXorf38Q8TB03 319 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 PIK3R5Q8WYR1 880 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 ATOH1Q92858 354 aaPredicted RBP13.64□□□□□ -0.23
DDB1-207ENST00000535967 BORCS6Q96GS4 357 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 POMKQ9H5K3 350 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 ARMCX3Q9UH62 379 aaPredicted RBP13.64□□□□□ -0.23
DDB1-207ENST00000535967 SIX4Q9UIU6 781 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 ZNF292O60281 2723 aa13.64□□□□□ -0.23
DDB1-207ENST00000535967 CACNA1AO00555 2505 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 C2orf71A6NGG8 1288 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 C2CD4DB7Z1M9 353 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 PPEF2O14830 753 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 STAU1O95793 577 aaKnown RBP13.63□□□□□ -0.23
DDB1-207ENST00000535967 KRT19P08727 400 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 ODC1P11926 461 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 GTF2H1P32780 548 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 LILRA4P59901 499 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 DLG4P78352 724 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 MYO1EQ12965 1108 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 ZACNQ401N2 412 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 CCDC40Q4G0X9 1142 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 RTP2Q5QGT7 225 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 KIAA0319Q5VV43 1072 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 ANKS3Q6ZW76 656 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 APPL2Q8NEU8 664 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 RIPOR3Q96MK2 946 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 RXFP1Q9HBX9 757 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 FNIP2Q9P278 1114 aa13.63□□□□□ -0.23
DDB1-207ENST00000535967 PTPRDP23468 1912 aa13.62□□□□□ -0.23
DDB1-207ENST00000535967 KPNA7A9QM74 516 aa13.62□□□□□ -0.23
DDB1-207ENST00000535967 LILRB3O75022 631 aa13.62□□□□□ -0.23
DDB1-207ENST00000535967 CXCL14O95715 111 aa13.62□□□□□ -0.23
DDB1-207ENST00000535967 C1RP00736 705 aa13.62□□□□□ -0.23
DDB1-207ENST00000535967 CCDC192P0DO97 292 aa13.62□□□□□ -0.23
DDB1-207ENST00000535967 TYMPP19971 482 aa13.62□□□□□ -0.23
DDB1-207ENST00000535967 TKTP29401 623 aaKnown RBP13.62□□□□□ -0.23
DDB1-207ENST00000535967 ATICP31939 592 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms