RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 TRPC3Q13507 836 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 LY6KQ17RY6 165 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 LACTB2Q53H82 288 aaPredicted RBP13.92□□□□□ -0.18
LDLR-203ENST00000535915 ANKRD42Q8N9B4 389 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.92□□□□□ -0.182e-7■□□□□ 10.3
LDLR-203ENST00000535915 SEPT1Q8WYJ6 367 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 DNPEPQ9ULA0 475 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 ZNF148Q9UQR1 794 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 IVNS1ABPQ9Y6Y0 642 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 LTBP3Q9NS15 1303 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 LIASO43766 372 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 TJP3O95049 919 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 WEE2P0C1S8 567 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 ZNF252P-AS1Q0IIN9 211 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 ITIH4Q14624 930 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 DUOXA2Q1HG44 320 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 SGSM1Q2NKQ1 1148 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 GPAT2Q6NUI2 795 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 VSTM1Q6UX27 236 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 MFSD7Q6UXD7 560 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 SCARA5Q6ZMJ2 495 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 RIOX2Q8IUF8 465 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 RNF149Q8NC42 400 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 TMEM35BQ8NCS4 154 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 RBM15Q96T37 977 aaKnown RBP eCLIP13.91□□□□□ -0.185e-8■■■■□ 21.2
LDLR-203ENST00000535915 ACO2Q99798 780 aaKnown RBP13.91□□□□□ -0.18
LDLR-203ENST00000535915 NIF3L1Q9GZT8 377 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 MLXIPLQ9NP71 852 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 OGTO15294 1046 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 LSM8O95777 96 aaKnown RBP13.91□□□□□ -0.18
LDLR-203ENST00000535915 PRKCBP05771 671 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 BRAFP15056 766 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 TFAMQ00059 246 aaKnown RBP13.91□□□□□ -0.18
LDLR-203ENST00000535915 LAMTOR4Q0VGL1 99 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 GRM1Q13255 1194 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 MAPK6Q16659 721 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 IER5Q5VY09 327 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 HIBCHQ6NVY1 386 aaPredicted RBP13.91□□□□□ -0.18
LDLR-203ENST00000535915 ZBTB8OSQ8IWT0 167 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 LRRC71Q8N4P6 559 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 ACSF2Q96CM8 615 aaPredicted RBP13.91□□□□□ -0.18
LDLR-203ENST00000535915 CCDC77Q9BR77 488 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 SLC40A1Q9NP59 571 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 SUFUQ9UMX1 484 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 MCM3APO60318 1980 aa13.91□□□□□ -0.18
LDLR-203ENST00000535915 A0A0G2JMZ2 1700 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 LRRC37A2A6NM11 1700 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 USP2O75604 605 aaPredicted RBP13.9□□□□□ -0.18
LDLR-203ENST00000535915 TCEA3O75764 348 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 EDNRBP24530 442 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 VGLL4Q14135 290 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 CYP4F22Q6NT55 531 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 METTL7BQ6UX53 244 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 CYP4X1Q8N118 509 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 FHDC1Q9C0D6 1143 aaPredicted RBP13.9□□□□□ -0.18
LDLR-203ENST00000535915 CD2APQ9Y5K6 639 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 PPP2R3BQ9Y5P8 575 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 TCP11X1B4DZS4 312 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 CDH16O75309 829 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 TGFB3P10600 412 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 GHRP10912 638 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 MAGEA4P43358 317 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 OSTNP61366 133 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 OGDHQ02218 1023 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 ZNF699Q32M78 642 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 CYP4A22Q5TCH4 519 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 SPOCD1Q6ZMY3 1216 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 ERICH1Q86X53 443 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 TRIM50Q86XT4 487 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 ZCCHC9Q8N567 271 aaKnown RBP13.9□□□□□ -0.18
LDLR-203ENST00000535915 GLIS1Q8NBF1 620 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 CCHCR1Q8TD31 782 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 HAUS1Q96CS2 278 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 FAM167AQ96KS9 214 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 KLC4Q9NSK0 619 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 GPRC5DQ9NZD1 345 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 NAALADL1Q9UQQ1 740 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 SNCAIPQ9Y6H5 919 aa13.9□□□□□ -0.18
LDLR-203ENST00000535915 RASSF9O75901 435 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 ZSCAN5DPP0CG00 497 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 CETPP11597 493 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 ARSEP51690 589 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 MCL1Q07820 350 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 ADCY1Q08828 1119 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 MXD4Q14582 209 aaPredicted RBP13.89□□□□□ -0.19
LDLR-203ENST00000535915 STAT4Q14765 748 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 SURF1Q15526 300 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 EAPPQ56P03 285 aaPredicted RBP13.89□□□□□ -0.19
LDLR-203ENST00000535915 TXNRD3NBQ6F5E7 133 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 CEP128Q6ZU80 1094 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 THNSL1Q8IYQ7 743 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 GDAP1Q8TB36 358 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 TCP11Q8WWU5 503 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 ZNF668Q96K58 619 aaPredicted RBP13.89□□□□□ -0.19
LDLR-203ENST00000535915 SPATC1LQ9H0A9 340 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 CPSF3Q9UKF6 684 aaKnown RBP13.89□□□□□ -0.19
LDLR-203ENST00000535915 TCRBV5S1A1TA0A578 114 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 LRRD1A4D1F6 860 aa13.89□□□□□ -0.19
LDLR-203ENST00000535915 DNALI1O14645 258 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms