RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PLEKHA8Q96JA3 519 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 TEX13BQ9BXU2 312 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 JMJD4Q9H9V9 463 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 CCL15-CCL14A0A0B4J2E2 113 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 NDUFS3O75489 264 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 CCL15Q16663 113 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 RAB42Q8N4Z0 105 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 SNRNP27Q8WVK2 155 aaKnown RBP13.2□□□□□ -0.3
SPG11-203ENST00000535302 LAMC1P11047 1609 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 CAND2O75155 1236 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 CYBBP04839 570 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 FXR1P51114 621 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPG11-203ENST00000535302 ST8SIA6P61647 398 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 RBP5P82980 135 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 KIF2BQ8N4N8 673 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 RIN2Q8WYP3 895 aaPredicted RBP13.2□□□□□ -0.3
SPG11-203ENST00000535302 BBS2Q9BXC9 721 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 PPIEQ9UNP9 301 aaKnown RBP13.2□□□□□ -0.3
SPG11-203ENST00000535302 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 GRK2P25098 689 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 DDX39BQ13838 428 aaKnown RBP13.2□□□□□ -0.3
SPG11-203ENST00000535302 USP10Q14694 798 aaKnown RBP13.2□□□□□ -0.3
SPG11-203ENST00000535302 FAXCQ5TGI0 409 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 THAP11Q96EK4 314 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 SMARCAD1Q9H4L7 1026 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 PRG3Q9Y2Y8 225 aaPredicted RBP13.2□□□□□ -0.3
SPG11-203ENST00000535302 APOA1P02647 267 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 UCHL3P15374 230 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 XKR3Q5GH77 459 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 ALKBH2Q6NS38 261 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 PARP9Q8IXQ6 854 aa13.2□□□□□ -0.3
SPG11-203ENST00000535302 IQCA1LA6NCM1 817 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 H0Y626 953 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 TBC1D4O60343 1298 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 TRIM16O95361 564 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 HLA-DRAP01903 254 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 RABGAP1LQ5R372 815 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 CHN1P15882 459 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 YY1P25490 414 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 KCNJ1P48048 391 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 UNKQ9C0B0 810 aaKnown RBP13.19□□□□□ -0.3
SPG11-203ENST00000535302 FBXO28Q9NVF7 368 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 ZNF197O14709 1029 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 TPST1O60507 370 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 AKIRIN2Q53H80 203 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 FBXW10Q5XX13 1052 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 GPAT2Q6NUI2 795 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 PTPRN2Q92932 1015 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 CPB2Q96IY4 423 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 IL25Q9H293 177 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 P4HA2O15460 535 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 RGS5O15539 181 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 ITGB3P05106 788 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 PGK2P07205 417 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
SPG11-203ENST00000535302 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 RAD51Q06609 339 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 TERF2Q15554 542 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 PTRHD1Q6GMV3 140 aaKnown RBP13.19□□□□□ -0.3
SPG11-203ENST00000535302 SEPT1Q8WYJ6 367 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 MTERF3Q96E29 417 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 SGF29Q96ES7 293 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 GPRC5CQ9NQ84 441 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
SPG11-203ENST00000535302 ARHGEF38Q9NXL2 777 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 ABI2Q9NYB9 513 aaPredicted RBP13.19□□□□□ -0.3
SPG11-203ENST00000535302 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
SPG11-203ENST00000535302 A2ML1A8K2U0 1454 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 HIC1Q14526 733 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 RARS2Q5T160 578 aaKnown RBP13.19□□□□□ -0.3
SPG11-203ENST00000535302 MEI1Q5TIA1 1274 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 SHCBP1Q8NEM2 672 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 TMEM245Q9H330 911 aa13.19□□□□□ -0.3
SPG11-203ENST00000535302 C3orf70A6NLC5 250 aaPredicted RBP13.18□□□□□ -0.3
SPG11-203ENST00000535302 PHF20L1A8MW92 1017 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 ALDH1A1P00352 501 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 TRIM72Q6ZMU5 477 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 C16orf86Q6ZW13 317 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 RCOR2Q8IZ40 523 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 ZC3H7BQ9UGR2 993 aaKnown RBP13.18□□□□□ -0.3
SPG11-203ENST00000535302 DGAT1O75907 488 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 ATP6V1B1P15313 513 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 CASP4P49662 377 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 SH3BP5LQ7L8J4 393 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 RBM12Q9NTZ6 932 aaKnown RBP13.18□□□□□ -0.3
SPG11-203ENST00000535302 CYP2C9P11712 490 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 TSC22D1Q15714 1073 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 RBM15Q96T37 977 aaKnown RBP eCLIP13.18□□□□□ -0.39e-7■■■■□ 22.2
SPG11-203ENST00000535302 FAM187AA6NFU0 413 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 SLC37A4O43826 429 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 RASSF9O75901 435 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 NCAM1P13591 858 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 ENOSF1Q7L5Y1 443 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 ATL2Q8NHH9 583 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 USP6NLQ92738 828 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 MOV10L1Q9BXT6 1211 aaKnown RBP13.18□□□□□ -0.3
SPG11-203ENST00000535302 SPON1Q9HCB6 807 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 MYO1CO00159 1063 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 ZBTB22O15209 634 aa13.18□□□□□ -0.3
SPG11-203ENST00000535302 HUNKP57058 714 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms