RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 SLITRK3O94933 977 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 CFIP05156 583 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 OR4Q2P0C623 313 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 CPB1P15086 417 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 GABRR2P28476 465 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 WEE1P30291 646 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 PI4KAP42356 2102 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 ATXN3P54252 364 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-206ENST00000535290 EPHB3P54753 998 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 CYP4F8P98187 520 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 CYP4F3Q08477 520 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 PSMD2Q13200 908 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 PRPF4BQ13523 1007 aaKnown RBP9.09□□□□□ -0.95
CLIP1-206ENST00000535290 NECTIN1Q15223 517 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 FAM187BQ17R55 369 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 ZNF280DQ6N043 979 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 MOXD1Q6UVY6 613 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 LPCAT2Q7L5N7 544 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 MAEAQ7L5Y9 396 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 SLCO6A1Q86UG4 719 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 MARCH9Q86YJ5 346 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 MINDY1Q8N5J2 469 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 CCDC148Q8NFR7 591 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 BEST2Q8NFU1 509 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 OLIG1Q8TAK6 271 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 RIN3Q8TB24 985 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 ACDQ96AP0 544 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 CNOT6LQ96LI5 555 aaKnown RBP9.09□□□□□ -0.95
CLIP1-206ENST00000535290 SLC46A2Q9BY10 475 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 KCNMB3Q9NPA1 279 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 DKK4Q9UBT3 224 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 PILRBQ9UKJ0 227 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 TBX20Q9UMR3 447 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 CCL26Q9Y258 94 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 SLC27A5Q9Y2P5 690 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 THADAQ6YHU6 1953 aa9.09□□□□□ -0.95
CLIP1-206ENST00000535290 GOLGA4Q13439 2230 aaKnown RBP9.09□□□□□ -0.95
CLIP1-206ENST00000535290 PTPRQQ9UMZ3 2332 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 PLXNB3Q9ULL4 1909 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 HNRNPLP14866 589 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLIP1-206ENST00000535290 LIG1P18858 919 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 ITPKAP23677 461 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 GJA4P35212 333 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 RCAN1P53805 252 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 NLRP5P59047 1200 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 GFPT1Q06210 699 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-206ENST00000535290 HNRNPDQ14103 355 aaKnown RBP9.08□□□□□ -0.96
CLIP1-206ENST00000535290 MAPK6Q16659 721 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 ARHGAP15Q53QZ3 475 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 CDCA2Q69YH5 1023 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-206ENST00000535290 NCAPH2Q6IBW4 605 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 DHX32Q7L7V1 743 aaKnown RBP9.08□□□□□ -0.96
CLIP1-206ENST00000535290 TTC30AQ86WT1 665 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 TTC9BQ8N6N2 239 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 ATAD1Q8NBU5 361 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 DDX12PQ92771 950 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 HAS1Q92839 578 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 PSMG2Q969U7 264 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 SUSD3Q96L08 255 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 FAM20AQ96MK3 541 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 ZMAT2Q96NC0 199 aaKnown RBP9.08□□□□□ -0.96
CLIP1-206ENST00000535290 HNRNPABQ99729 332 aaKnown RBP9.08□□□□□ -0.96
CLIP1-206ENST00000535290 ADPGKQ9BRR6 497 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 MFRPQ9BY79 579 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 CAPN10Q9HC96 672 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 SLC6A14Q9UN76 642 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 NUB1Q9Y5A7 615 aa9.08□□□□□ -0.96
CLIP1-206ENST00000535290 CCDC196A0A1B0GTZ2 297 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 M0R2N6 131 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 ACKR2O00590 384 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 P2RY2P41231 377 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 ALDH1A3P47895 512 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 RARRES1P49788 294 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 AMPD2Q01433 879 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 PLD1Q13393 1074 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 NTRK3Q16288 839 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 INF2Q27J81 1249 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 C2orf27AQ580R0 203 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 XKR4Q5GH76 650 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 PEAR1Q5VY43 1037 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-206ENST00000535290 LYSMD4Q5XG99 296 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 CENPPQ6IPU0 288 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 ALKAL1Q6UXT8 129 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 TOGARAM2Q6ZUX3 1019 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 ZBTB8OSQ8IWT0 167 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 SCUBE3Q8IX30 993 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 CMTM8Q8IZV2 173 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 CCDC33Q8N5R6 958 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 CEP120Q8N960 986 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 APPL2Q8NEU8 664 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 PIP4K2CQ8TBX8 421 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 USP33Q8TEY7 942 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 BSNDQ8WZ55 320 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 USP13Q92995 863 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-206ENST00000535290 CD101Q93033 1021 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 C18orf25Q96B23 403 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-206ENST00000535290 TBC1D32Q96NH3 1257 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 C22orf23Q9BZE7 217 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 CCDC113Q9H0I3 377 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 IL21Q9HBE4 155 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms