RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 POU5F1Q01860 360 aaKnown RBP9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 DUSP4Q13115 394 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 GPR17Q13304 367 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 PLD1Q13393 1074 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 SNW1Q13573 536 aaKnown RBP9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 MYBPC2Q14324 1141 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 MLF2Q15773 248 aaPredicted RBP9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 ZSCAN23Q3MJ62 389 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 TANGO2Q6ICL3 276 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 PHLDB3Q6NSJ2 640 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 ARMCX5Q6P1M9 558 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 POTEHQ6S545 545 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 METTL23Q86XA0 190 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 BRSK2Q8IWQ3 736 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 OR10T2Q8NGX3 314 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 HPS3Q969F9 1004 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 ZNF560Q96MR9 790 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 CBWD1Q9BRT8 395 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 PLA2G2FQ9BZM2 168 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 FOXQ1Q9C009 403 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 LRRC27Q9C0I9 530 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 TNMDQ9H2S6 317 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 CRISPLD1Q9H336 500 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 PCIF1Q9H4Z3 704 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 TMEM206Q9H813 350 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 RBAKQ9NYW8 714 aaPredicted RBP9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 CALCOCO1Q9P1Z2 691 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 DSEQ9UL01 958 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 SLC27A5Q9Y2P5 690 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 WDFY4Q6ZS81 3184 aa9.22□□□□□ -0.93
SFSWAP-202ENST00000535202 TULP2O00295 520 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 CTIFO43310 598 aaKnown RBP9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 EXTL3O43909 919 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 GFRA3O60609 400 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 ECI2O75521 394 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 SOAT2O75908 522 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 MICAL2O94851 1124 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 MBD3O95983 291 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 LDHAP00338 332 aaKnown RBP9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 CYP11A1P05108 521 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 BRD2P25440 801 aaKnown RBP9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 POLR2BP30876 1174 aaKnown RBP9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 ALDH1A3P47895 512 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 CDR1P51861 262 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 EPHB3P54753 998 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 AMPD3Q01432 767 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 GRM2Q14416 872 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 ANGPT1Q15389 498 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 TEAD2Q15562 447 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 E2F4Q16254 413 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 SV2CQ496J9 727 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 SLC39A12Q504Y0 691 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 SLC44A4Q53GD3 710 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 FAM78AQ5JUQ0 283 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 WSCD1Q658N2 575 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 CENPPQ6IPU0 288 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 SHC4Q6S5L8 630 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 LRSAM1Q6UWE0 723 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 STXBP4Q6ZWJ1 553 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 NT5DC4Q86YG4 428 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 THEM5Q8N1Q8 247 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 TTC9BQ8N6N2 239 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 IQUBQ8NA54 791 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 ATAD1Q8NBU5 361 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 LEMD2Q8NC56 503 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 GLIS3Q8NEA6 775 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 PJA1Q8NG27 643 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 FAM200AQ8TCP9 573 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 ELSPBP1Q96BH3 223 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 SHDQ96IW2 340 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 FAM84AQ96KN4 292 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 TIGD1Q96MW7 591 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 ZNF830Q96NB3 372 aaPredicted RBP9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 SEPT5Q99719 369 aaPredicted RBP9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 TRIM9Q9C026 710 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 DNAJC25Q9H1X3 360 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 CUEDC2Q9H467 287 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 SLITRK6Q9H5Y7 841 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 ZFP14Q9HCL3 533 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 KBTBD4Q9NVX7 518 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 SIT1Q9Y3P8 196 aa9.21□□□□□ -0.94
SFSWAP-202ENST00000535202 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 A0A1W2PRU2 124 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 KANSL1LA0AUZ9 987 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 KPNA7A9QM74 516 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 POLR2DO15514 142 aaKnown RBP9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 LRRN2O75325 713 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 MOSPD3O75425 235 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 ITGB3P05106 788 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 KRT19P08727 400 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 TMEM191BP0C7N4 346 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 FCARP24071 287 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 PNPLA4P41247 253 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 ME1P48163 572 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 EPHA5P54756 1037 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 STARD6P59095 220 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 PRKCQQ04759 706 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 BFSP1Q12934 665 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 PKP1Q13835 747 aa9.2□□□□□ -0.94
SFSWAP-202ENST00000535202 UBXN2BQ14CS0 331 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms