RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 CNKSR1Q969H4 720 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 SLITRK1Q96PX8 696 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 KLF6Q99612 283 aaPredicted RBP10.83□□□□□ -0.68
DDB1-204ENST00000535147 MRPL47Q9HD33 250 aaKnown RBP10.83□□□□□ -0.68
DDB1-204ENST00000535147 ZNF541Q9H0D2 1346 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 PRPF4O43172 522 aaKnown RBP eCLIP10.83□□□□□ -0.68
DDB1-204ENST00000535147 ZC3H11AO75152 810 aaKnown RBP eCLIP10.83□□□□□ -0.68
DDB1-204ENST00000535147 C4BPAP04003 597 aaKnown RBP10.83□□□□□ -0.68
DDB1-204ENST00000535147 KRT4P19013 534 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 SSTR1P30872 391 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 BPIFB4P59827 614 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 OGDHQ02218 1023 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 CUL2Q13617 745 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 PLEKHG4Q58EX7 1191 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 HHATQ5VTY9 493 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 SWSAP1Q6NVH7 229 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 OTOAQ7RTW8 1153 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 LONP2Q86WA8 852 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 SAMD3Q8N6K7 520 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 RBBP8NLQ8NC74 664 aaPredicted RBP10.83□□□□□ -0.68
DDB1-204ENST00000535147 C10orf82Q8WW14 230 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 SPIRE2Q8WWL2 714 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 LBHD1Q9BQE6 289 aaPredicted RBP10.83□□□□□ -0.68
DDB1-204ENST00000535147 MOV10L1Q9BXT6 1211 aaKnown RBP10.83□□□□□ -0.68
DDB1-204ENST00000535147 HAPLN2Q9GZV7 340 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 ALG13Q9NP73 1137 aaKnown RBP10.83□□□□□ -0.68
DDB1-204ENST00000535147 NPHS2Q9NP85 383 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 SEPT9Q9UHD8 586 aaPredicted RBP10.83□□□□□ -0.68
DDB1-204ENST00000535147 DCTN4Q9UJW0 460 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 NUB1Q9Y5A7 615 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 PCDHA10Q9Y5I2 948 aa10.83□□□□□ -0.68
DDB1-204ENST00000535147 SGK1O00141 431 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 ONECUT3O60422 494 aaPredicted RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 ENTPD5O75356 428 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 ADRA1DP25100 572 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 RAD23BP54727 409 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 DYNLT1P63172 113 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 KRT76Q01546 638 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 ZNF394Q53GI3 561 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 TAF1BQ53T94 588 aaPredicted RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 ARHGEF16Q5VV41 709 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 ALLCQ8N6M5 410 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 TTC8Q8TAM2 541 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 MCEEQ96PE7 176 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 SENP7Q9BQF6 1050 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 RNPEPL1Q9HAU8 725 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 BATF3Q9NR55 127 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 ZNF646O15015 1829 aaPredicted RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 LRRD1A4D1F6 860 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 TYROBPO43914 113 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 STBD1O95210 358 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 POTEJP0CG39 1038 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 CHRM1P11229 460 aaPredicted RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 GARTP22102 1010 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 SFNP31947 248 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 GPX6P59796 221 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 NR1H3Q13133 447 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 MAPK6Q16659 721 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 PARP6Q2NL67 630 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 RNASEH2BQ5TBB1 312 aaKnown RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 PHF13Q86YI8 300 aaPredicted RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 OR5B17Q8NGF7 314 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 ZNF75CPQ92670 426 aaPredicted RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 WNK4Q96J92 1243 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 POLR3FQ9H1D9 316 aaPredicted RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 UBN1Q9NPG3 1134 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 PXMP2Q9NR77 195 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 AGO2Q9UKV8 859 aaKnown RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 COL2A1P02458 1487 aaPredicted RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 EXTL3O43909 919 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 TJP3O95049 919 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 HARSP12081 509 aaKnown RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 CALB2P22676 271 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 ALDH3A1P30838 453 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 LMNB2Q03252 620 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 TFDP1Q14186 410 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 PSMD6Q15008 389 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 MSS51Q4VC12 460 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 EAPPQ56P03 285 aaPredicted RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 SPOCD1Q6ZMY3 1216 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 MTDHQ86UE4 582 aaKnown RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 TDRPQ86YL5 185 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 CCDC125Q86Z20 511 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 AGGF1Q8N302 714 aaeCLIP10.82□□□□□ -0.68
DDB1-204ENST00000535147 SUPT20HQ8NEM7 779 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 TMEM143Q96AN5 459 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 NAF1Q96HR8 494 aaKnown RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 NUDCD1Q96RS6 583 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 PARVAQ9NVD7 372 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 ANKFY1Q9P2R3 1169 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 SMG5Q9UPR3 1016 aaKnown RBP10.82□□□□□ -0.68
DDB1-204ENST00000535147 RIPK3Q9Y572 518 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 SCINQ9Y6U3 715 aa10.82□□□□□ -0.68
DDB1-204ENST00000535147 CCDC189A1A4V9 331 aa10.81□□□□□ -0.68
DDB1-204ENST00000535147 TMEM191CA6NGB0 347 aa10.81□□□□□ -0.68
DDB1-204ENST00000535147 ALOX15BO15296 676 aa10.81□□□□□ -0.68
DDB1-204ENST00000535147 DCTN3O75935 186 aa10.81□□□□□ -0.68
DDB1-204ENST00000535147 SMNDC1O75940 238 aaKnown RBP eCLIP10.81□□□□□ -0.68
DDB1-204ENST00000535147 ASNSP08243 561 aa10.81□□□□□ -0.68
DDB1-204ENST00000535147 TMEM191BP0C7N4 346 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms