RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 GABPB1Q06547 395 aaPredicted RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 ZNF394Q53GI3 561 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 DNAJC24Q6P3W2 148 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 SEC14L1Q92503 715 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 LENG1Q96BZ8 264 aaPredicted RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 DDX47Q9H0S4 455 aaKnown RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 FAM114A2Q9NRY5 505 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 POLIQ9UNA4 740 aa14.22□□□□□ -0.13
BEST1-208ENST00000534553 PIN4Q9Y237 131 aaKnown RBP14.22□□□□□ -0.13
BEST1-208ENST00000534553 DOCK3Q8IZD9 2030 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 PODXLO00592 558 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 SEPT4O43236 478 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 CALCAP01258 141 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 MYBL2P10244 700 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 RARBP10826 455 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 CD19P15391 556 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 PNPLA4P41247 253 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 FNTAP49354 379 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 RAD23BP54727 409 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 BEX3Q00994 111 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 TMEM62Q0P6H9 643 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 ZBTB6Q15916 424 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 CNGA2Q16280 664 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 CYP1B1Q16678 543 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 LRRC38Q5VT99 294 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 SLC13A5Q86YT5 568 aaPredicted RBP14.21□□□□□ -0.13
BEST1-208ENST00000534553 MREGQ8N565 214 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 C1orf131Q8NDD1 294 aaKnown RBP14.21□□□□□ -0.13
BEST1-208ENST00000534553 BTBD6Q96KE9 485 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 HOMER3Q9NSC5 361 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 SNTG2Q9NY99 539 aa14.21□□□□□ -0.13
BEST1-208ENST00000534553 CHORDC1Q9UHD1 332 aaPredicted RBP14.21□□□□□ -0.13
BEST1-208ENST00000534553 TMEM191CA6NGB0 347 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 CFHP08603 1231 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 CYP3A5P20815 502 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 FGFR4P22455 802 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 PIGHQ14442 188 aaPredicted RBP14.2□□□□□ -0.14
BEST1-208ENST00000534553 XKR4Q5GH76 650 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 GNASQ5JWF2 1037 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 ALKAL1Q6UXT8 129 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 RPAINQ86UA6 219 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 KATNAL2Q8IYT4 538 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 NIPA2Q8N8Q9 360 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 C12orf50Q8NA57 414 aaPredicted RBP14.2□□□□□ -0.14
BEST1-208ENST00000534553 SLC4A11Q8NBS3 891 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 ZNF560Q96MR9 790 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 NT5C1AQ9BXI3 368 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 FAM129AQ9BZQ8 928 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 SMYD3Q9H7B4 428 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 PCYOX1Q9UHG3 505 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 AMACRQ9UHK6 382 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 GTF2IRD1Q9UHL9 959 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 HPCAL4Q9UM19 191 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 TCRBV5S1A1TA0A578 114 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 ECM2O94769 699 aaPredicted RBP14.2□□□□□ -0.14
BEST1-208ENST00000534553 PYGMP11217 842 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 ITGA4P13612 1032 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 KCNE1P15382 129 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 FLT3LGP49771 235 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 DRG2P55039 364 aaKnown RBP14.2□□□□□ -0.14
BEST1-208ENST00000534553 SNX16P57768 344 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 DR1Q01658 176 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 ZNF211Q13398 564 aaPredicted RBP14.2□□□□□ -0.14
BEST1-208ENST00000534553 SGO2Q562F6 1265 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 ALS2CLQ60I27 953 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 SCARA3Q6AZY7 606 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 DCUN1D2Q6PH85 259 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 SND1Q7KZF4 910 aaKnown RBP eCLIP14.2□□□□□ -0.14
BEST1-208ENST00000534553 SESTD1Q86VW0 696 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 UNC93AQ86WB7 457 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 HACE1Q8IYU2 909 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 GOLGA6L1Q8N7Z2 621 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 FAM71BQ8TC56 605 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 FNIP1Q8TF40 1166 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 TFAP2BQ92481 460 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 CELF4Q9BZC1 486 aaKnown RBP14.2□□□□□ -0.14
BEST1-208ENST00000534553 FEZ2Q9UHY8 353 aaPredicted RBP14.2□□□□□ -0.14
BEST1-208ENST00000534553 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.2□□□□□ -0.14
BEST1-208ENST00000534553 MGAMO43451 1857 aa14.2□□□□□ -0.14
BEST1-208ENST00000534553 CITO14578 2027 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 FSCN2O14926 492 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 RECQL4O94761 1208 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 CTGFP29279 349 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 MARCKSL1P49006 195 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 CARSP49589 748 aaKnown RBP14.19□□□□□ -0.14
BEST1-208ENST00000534553 PPP1R15BQ5SWA1 713 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 TRPV1Q8NER1 839 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 EXD1Q8NHP7 514 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 CASKIN2Q8WXE0 1202 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 IFT81Q8WYA0 676 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 TRIB2Q92519 343 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 LRRC45Q96CN5 670 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 RBM41Q96IZ5 413 aaKnown RBP14.19□□□□□ -0.14
BEST1-208ENST00000534553 EIF2AQ9BY44 585 aaKnown RBP14.19□□□□□ -0.14
BEST1-208ENST00000534553 SDCBP2Q9H190 292 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 CDHR5Q9HBB8 845 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 CHST12Q9NRB3 414 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 PARP2Q9UGN5 583 aa14.19□□□□□ -0.14
BEST1-208ENST00000534553 GOLGA6BA6NDN3 693 aa14.18□□□□□ -0.14
BEST1-208ENST00000534553 OAS2P29728 719 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms