RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 KANSL3Q9P2N6 904 aa11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 UBQLN1Q9UMX0 589 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-218ENST00000533761 EIF3CLB5ME19 914 aaKnown RBP11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 DGKIO75912 1065 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 RECQL4O94761 1208 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 ASS1P00966 412 aaKnown RBP11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 KRT19P08727 400 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 PNPLA4P41247 253 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 ARID5AQ03989 594 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 ARHGAP44Q17R89 818 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 ARHGAP29Q52LW3 1261 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 LMBRD2Q68DH5 695 aaPredicted RBP11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 JADE1Q6IE81 842 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 WDR59Q6PJI9 974 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 AGMOQ6ZNB7 445 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 HERC6Q8IVU3 1022 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 OR5B17Q8NGF7 314 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 LPPQ93052 612 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 YME1L1Q96TA2 773 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 EIF3CQ99613 913 aaKnown RBP11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 NIF3L1Q9GZT8 377 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 PPP2R2CQ9Y2T4 447 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 INSL6Q9Y581 213 aa11.71□□□□□ -0.54
CCDC90B-218ENST00000533761 ARL5CA6NH57 179 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 MEIS3P2A8K0S8 358 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 RNF225M0QZC1 329 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 CITO14578 2027 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 STAU1O95793 577 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 NFICP08651 508 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 FGFR1P11362 822 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 KCNE1P15382 129 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 CYP3A5P20815 502 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 MLH1P40692 756 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 USP8P40818 1118 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 PDE6CP51160 858 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 KIF11P52732 1056 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 CUL2Q13617 745 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 BMS1Q14692 1282 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 ZNF667Q5HYK9 610 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 DPY19L2P1Q6NXN4 242 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 PPP1R2P3Q6NXS1 205 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 FAM117BQ6P1L5 589 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 KIAA1328Q86T90 577 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 EFCAB13Q8IY85 973 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 URGCPQ8TCY9 931 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 SHC3Q92529 594 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 SEMA4DQ92854 862 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 ZNF560Q96MR9 790 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 GAD1Q99259 594 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 RAD9AQ99638 391 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 MRPL9Q9BYD2 267 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 VRTNQ9H8Y1 702 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 SPTLC3Q9NUV7 552 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 DPP3Q9NY33 737 aa11.7□□□□□ -0.54
CCDC90B-218ENST00000533761 PTPRJQ12913 1337 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 RALGAPA2Q2PPJ7 1873 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 RANBP2P49792 3224 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 A0A1W2PPC1 479 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 KRT86O43790 486 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 LRRN2O75325 713 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 KRT5P13647 590 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 PAX3P23760 479 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 TNNC1P63316 161 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 PTK2Q05397 1052 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 SLC18A3Q16572 532 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 NOMO2Q5JPE7 1267 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 CLLU1OSQ5K130 101 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 DNTTIP2Q5QJE6 756 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 PRPF38BQ5VTL8 546 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 E4F1Q66K89 784 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 ALKAL1Q6UXT8 129 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 TMCO2Q7Z6W1 182 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 ZNF677Q86XU0 584 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 TMEM192Q8IY95 271 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 LRRC52Q8N7C0 313 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 HELQQ8TDG4 1101 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 ZFP42Q96MM3 310 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 CHP1Q99653 195 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 PRO3102Q9H379 93 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 HAUS4Q9H6D7 363 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 KLK14Q9P0G3 267 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 ARHGAP20Q9P2F6 1191 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
CCDC90B-218ENST00000533761 TBKBP1A7MCY6 615 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 INPPL1O15357 1258 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 VNN1O95497 513 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 ITGB3P05106 788 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 THP07101 528 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 EIF4A3P38919 411 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 WNT7BP56706 349 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 HTRA4P83105 476 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 APBA1Q02410 837 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 RNASELQ05823 741 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 KIF5AQ12840 1032 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 PTPN14Q15678 1187 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 XKR4Q5GH76 650 aa11.68□□□□□ -0.54
CCDC90B-218ENST00000533761 HGSNATQ68CP4 663 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms