RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 RGL1Q9NZL6 768 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 NDOR1Q9UHB4 597 aa8.47□□□□□ -1.05
CASP4-212ENST00000533730 TNPO3Q9Y5L0 923 aaKnown RBP8.47□□□□□ -1.05
CASP4-212ENST00000533730 MORC2Q9Y6X9 1032 aaPredicted RBP8.47□□□□□ -1.05
CASP4-212ENST00000533730 MEGF11A6BM72 1044 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 MSTNO14793 375 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 EFCAB14O75071 495 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 STBD1O95210 358 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 YWHABP31946 246 aaKnown RBP8.46□□□□□ -1.06
CASP4-212ENST00000533730 LONP1P36776 959 aaKnown RBP8.46□□□□□ -1.06
CASP4-212ENST00000533730 ANP32AP39687 249 aaKnown RBP8.46□□□□□ -1.06
CASP4-212ENST00000533730 CCT6AP40227 531 aaKnown RBP8.46□□□□□ -1.06
CASP4-212ENST00000533730 MRPS6P82932 125 aaKnown RBP8.46□□□□□ -1.06
CASP4-212ENST00000533730 CYP4A11Q02928 519 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 ITKQ08881 620 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 CTTNQ14247 550 aaKnown RBP8.46□□□□□ -1.06
CASP4-212ENST00000533730 ZNF460Q14592 562 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 STAT4Q14765 748 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 SEPT7Q16181 437 aaKnown RBP8.46□□□□□ -1.06
CASP4-212ENST00000533730 ZNF618Q5T7W0 954 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 ZBTB37Q5TC79 503 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 KRT79Q5XKE5 535 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 ANO5Q75V66 913 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 TRMT1LQ7Z2T5 733 aaKnown RBP8.46□□□□□ -1.06
CASP4-212ENST00000533730 FGD2Q7Z6J4 655 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 CHPFQ8IZ52 775 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 TDHQ8IZJ6 230 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 AHI1Q8N157 1196 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 MYO1HQ8N1T3 1032 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 USP38Q8NB14 1042 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 TRAPPC12Q8WVT3 735 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 DNAJB3Q8WWF6 145 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 SCLYQ96I15 445 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 CEP170P1Q96L14 293 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 CYP26B1Q9NR63 512 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 ATP6V1DQ9Y5K8 247 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 SQORQ9Y6N5 450 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 TANC1Q9C0D5 1861 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 UMODL1Q5DID0 1318 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 KDM3AQ9Y4C1 1321 aa8.46□□□□□ -1.06
CASP4-212ENST00000533730 VWA3AA6NCI4 1184 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 GPR39O43194 453 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 MAFO75444 373 aaPredicted RBP8.45□□□□□ -1.06
CASP4-212ENST00000533730 BAIAP3O94812 1187 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 FGBP02675 491 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 CXCL10P02778 98 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 CAPNS1P04632 268 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 POLGP54098 1239 aaPredicted RBP8.45□□□□□ -1.06
CASP4-212ENST00000533730 XKR9Q5GH70 373 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 RNF219Q5W0B1 726 aaPredicted RBP8.45□□□□□ -1.06
CASP4-212ENST00000533730 EFCAB12Q6NXP0 572 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 CATSPER3Q86XQ3 398 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 KIAA0319LQ8IZA0 1049 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 METTL13Q8N6R0 699 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 TCP11Q8WWU5 503 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 APBB2Q92870 758 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 CDK5RAP3Q96JB5 506 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 MEGF10Q96KG7 1140 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 DPH2Q9BQC3 489 aaPredicted RBP8.45□□□□□ -1.06
CASP4-212ENST00000533730 TMPRSS13Q9BYE2 586 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 FTOQ9C0B1 505 aaKnown RBP eCLIP8.45□□□□□ -1.06
CASP4-212ENST00000533730 NT5C3AQ9H0P0 336 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 FAM49AQ9H0Q0 323 aaPredicted RBP8.45□□□□□ -1.06
CASP4-212ENST00000533730 DBR1Q9UK59 544 aaKnown RBP8.45□□□□□ -1.06
CASP4-212ENST00000533730 TRPV2Q9Y5S1 764 aa8.45□□□□□ -1.06
CASP4-212ENST00000533730 WDR81Q562E7 1941 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 IGKV6-21A0A0C4DH24 114 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 OPA1O60313 960 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 MED24O75448 989 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 CLEC3AO75596 197 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 YEATS4O95619 227 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 CHRNA1P02708 482 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 POU3F2P20265 443 aaPredicted RBP8.44□□□□□ -1.06
CASP4-212ENST00000533730 GBP1P32455 592 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 UBA7P41226 1012 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 RARRES1P49788 294 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 CRYBB1P53674 252 aaPredicted RBP8.44□□□□□ -1.06
CASP4-212ENST00000533730 NUCB2P80303 420 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 MGAT3Q09327 533 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 SLC39A14Q15043 492 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 STK38Q15208 465 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 PTPAQ15257 358 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 DHCR24Q15392 516 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 TMEM240Q5SV17 173 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 PLA2G4FQ68DD2 849 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 CNKSR3Q6P9H4 555 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 ZNF365Q70YC5 407 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 DEFB128Q7Z7B8 93 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 MRPL41Q8IXM3 137 aaKnown RBP8.44□□□□□ -1.06
CASP4-212ENST00000533730 LINC01465Q8N7H1 131 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 BAHD1Q8TBE0 780 aaPredicted RBP8.44□□□□□ -1.06
CASP4-212ENST00000533730 HERVK_113Q902F9 699 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 SEPT8Q92599 483 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 CALML4Q96GE6 196 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 CCDC74BQ96LY2 380 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 UBL7Q96S82 380 aaPredicted RBP8.44□□□□□ -1.06
CASP4-212ENST00000533730 YIPF4Q9BSR8 244 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 CELF4Q9BZC1 486 aaKnown RBP8.44□□□□□ -1.06
CASP4-212ENST00000533730 TRIM8Q9BZR9 551 aa8.44□□□□□ -1.06
CASP4-212ENST00000533730 DHX33Q9H6R0 707 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms