RNA–Protein interactions for RNA: ENST00000533507.5

NDUFS3-211, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-211ENST00000533507 HS1BP3Q53T59 392 aa28.26■■■□□ 2.11
NDUFS3-211ENST00000533507 C9orf50Q5SZB4 431 aa28.26■■■□□ 2.11
NDUFS3-211ENST00000533507 ZNF571Q7Z3V5 609 aaPredicted RBP28.26■■■□□ 2.11
NDUFS3-211ENST00000533507 TWNKQ96RR1 684 aa28.26■■■□□ 2.11
NDUFS3-211ENST00000533507 NT5C1AQ9BXI3 368 aa28.26■■■□□ 2.11
NDUFS3-211ENST00000533507 INSL6Q9Y581 213 aa28.26■■■□□ 2.11
NDUFS3-211ENST00000533507 MRPL42Q9Y6G3 142 aaKnown RBP28.26■■■□□ 2.11
NDUFS3-211ENST00000533507 TLL1O43897 1013 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 TACC1O75410 805 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 PAX3P23760 479 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 AARSP49588 968 aaKnown RBP eCLIP28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 RAD9BQ6WBX8 426 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 VPS36Q86VN1 386 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 METTL23Q86XA0 190 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 SLC20A1Q8WUM9 679 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 KBTBD7Q8WVZ9 684 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 TMEM176AQ96HP8 235 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 RNPC3Q96LT9 517 aaKnown RBP28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 HEXIM2Q96MH2 286 aaKnown RBP28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 PDCL3Q9H2J4 239 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 RC3H2Q9HBD1 1191 aaKnown RBP28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 CNTN6Q9UQ52 1028 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 PTPRSQ13332 1948 aa28.25■■■□□ 2.11
NDUFS3-211ENST00000533507 TMEM189-UBE2V1I3L0A0 370 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 THAP12O43422 761 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 TNFAIP3P21580 790 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 FECHP22830 423 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 RAD23BP54727 409 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 INCA1Q0VD86 236 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 NOP9Q86U38 636 aaKnown RBP28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 CEP57Q86XR8 500 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 PHOSPHO2Q8TCD6 241 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 EPS8L1Q8TE68 723 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 WHAMMQ8TF30 809 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 SUSD3Q96L08 255 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 ELOVL4Q9GZR5 314 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 ADAMTS1Q9UHI8 967 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 FAM170AA1A519 330 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 HCRTO43612 131 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 LMO2P25791 158 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 SSTR3P32745 418 aaPredicted RBP28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 CYLC1P35663 651 aaPredicted RBP28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 KCNT2Q6UVM3 1135 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 FIBCD1Q8N539 461 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 AGPAT1Q99943 283 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 SPTLC3Q9NUV7 552 aa28.24■■■□□ 2.11
NDUFS3-211ENST00000533507 SHHQ15465 462 aa28.23■■■□□ 2.11
NDUFS3-211ENST00000533507 ACOT1Q86TX2 421 aa28.23■■■□□ 2.11
NDUFS3-211ENST00000533507 TMEM173Q86WV6 379 aaPredicted RBP28.23■■■□□ 2.11
NDUFS3-211ENST00000533507 TMEM86AQ8N2M4 240 aa28.23■■■□□ 2.11
NDUFS3-211ENST00000533507 SLC4A11Q8NBS3 891 aa28.23■■■□□ 2.11
NDUFS3-211ENST00000533507 ZNF558Q96NG5 402 aa28.23■■■□□ 2.11
NDUFS3-211ENST00000533507 RAD9AQ99638 391 aa28.23■■■□□ 2.11
NDUFS3-211ENST00000533507 MARCH5Q9NX47 278 aa28.23■■■□□ 2.11
NDUFS3-211ENST00000533507 DDX43Q9NXZ2 648 aaKnown RBP28.23■■■□□ 2.11
NDUFS3-211ENST00000533507 EPN1Q9Y6I3 576 aaPredicted RBP28.23■■■□□ 2.11
NDUFS3-211ENST00000533507 SSU72P8A0A1W2PR75 194 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 ARHGEF37A1IGU5 675 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 M0QZQ0 153 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 WARSP23381 471 aaKnown RBP28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 BRD2P25440 801 aaKnown RBP28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 KIF11P52732 1056 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 ZNF132P52740 706 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 GFPT1Q06210 699 aaPredicted RBP28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 FAM171A1Q5VUB5 890 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 OSTM1Q86WC4 334 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 CCDC170Q8IYT3 715 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 UBE2OQ9C0C9 1292 aaKnown RBP28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 FAM124BQ9H5Z6 455 aaPredicted RBP28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 DSEQ9UL01 958 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 PYCARDQ9ULZ3 195 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 STXBP5LQ9Y2K9 1186 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 CEP290O15078 2479 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 MMEP08473 750 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 ACAT1P24752 427 aaKnown RBP28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 LHX1P48742 406 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 HTRA4P83105 476 aaPredicted RBP28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 MAPK8IP2Q13387 824 aaPredicted RBP28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 UNC93AQ86WB7 457 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 GLYCTKQ8IVS8 523 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 DESI2Q9BSY9 194 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 DNAI2Q9GZS0 605 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 DPEP3Q9H4B8 488 aa28.22■■■□□ 2.11
NDUFS3-211ENST00000533507 SF3B1O75533 1304 aaKnown RBP eCLIP28.21■■■□□ 2.111e-8■■■■■ 103.4
NDUFS3-211ENST00000533507 IPO7O95373 1038 aaKnown RBP28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 LAG3P18627 525 aa28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 RABGGTBP53611 331 aa28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 COL4A6Q14031 1691 aa28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 FUT10Q6P4F1 479 aa28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 TOGARAM2Q6ZUX3 1019 aa28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 LIMS2Q7Z4I7 341 aa28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 GPR62Q9BZJ7 368 aa28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 NOCTQ9UK39 431 aaKnown RBP28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 PCDHB8Q9UN66 801 aa28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 NME7Q9Y5B8 376 aa28.21■■■□□ 2.11
NDUFS3-211ENST00000533507 LAMA2P24043 3122 aaKnown RBP28.2■■■□□ 2.11
NDUFS3-211ENST00000533507 NDUFA10O95299 355 aa28.2■■■□□ 2.11
NDUFS3-211ENST00000533507 PAEPP09466 180 aa28.2■■■□□ 2.11
NDUFS3-211ENST00000533507 TKTP29401 623 aaKnown RBP28.2■■■□□ 2.11
NDUFS3-211ENST00000533507 OVOS1Q6IE37 1185 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms