RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 GTPBP10A4D1E9 387 aaKnown RBP18.4■□□□□ 0.54
PHRF1-205ENST00000533464 EEF1B2P24534 225 aaKnown RBP18.4■□□□□ 0.54
PHRF1-205ENST00000533464 GNASQ5JWF2 1037 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 GLRA4Q5JXX5 417 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 SLC7A14Q8TBB6 771 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 MTMR8Q96EF0 704 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 TSSK1BQ9BXA7 367 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 IDI2Q9BXS1 227 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 TRAF3IP3Q9Y228 551 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 ZC3H11AO75152 810 aaKnown RBP eCLIP18.39■□□□□ 0.54
PHRF1-205ENST00000533464 ZNF189O75820 626 aaPredicted RBP18.39■□□□□ 0.54
PHRF1-205ENST00000533464 RARRES1P49788 294 aa18.39■□□□□ 0.54
PHRF1-205ENST00000533464 DDR1Q08345 913 aa18.39■□□□□ 0.54
PHRF1-205ENST00000533464 PTK7Q13308 1070 aa18.39■□□□□ 0.54
PHRF1-205ENST00000533464 LCA5Q86VQ0 697 aa18.39■□□□□ 0.54
PHRF1-205ENST00000533464 ULK4Q96C45 1275 aa18.39■□□□□ 0.54
PHRF1-205ENST00000533464 PABPC3Q9H361 631 aaKnown RBP18.39■□□□□ 0.54
PHRF1-205ENST00000533464 NPHS2Q9NP85 383 aa18.39■□□□□ 0.54
PHRF1-205ENST00000533464 SLC38A7Q9NVC3 462 aa18.39■□□□□ 0.54
PHRF1-205ENST00000533464 BOLA3Q53S33 107 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 OTOP1Q7RTM1 612 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 KCNK18Q7Z418 384 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 SLC47A2Q86VL8 602 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 ATP8B4Q8TF62 1192 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 CYFIP2Q96F07 1278 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 SEC16BQ96JE7 1060 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 TBX2Q13207 712 aaPredicted RBP18.39■□□□□ 0.53
PHRF1-205ENST00000533464 DACT2Q5SW24 774 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 ZNF507Q8TCN5 953 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 PPCSQ9HAB8 311 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 KLC4Q9NSK0 619 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 ADA2Q9NZK5 511 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 L3MBTL1Q9Y468 752 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 LRRIQ3A6PVS8 624 aaPredicted RBP18.39■□□□□ 0.53
PHRF1-205ENST00000533464 TADA2AO75478 443 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 PCSK1P29120 753 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 CYP24A1Q07973 514 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 MYBPC2Q14324 1141 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 RFX8Q6ZV50 586 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 SH3RF1Q7Z6J0 888 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 ASIC4Q96FT7 647 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 DPP3Q9NY33 737 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 PSD3Q9NYI0 1048 aa18.39■□□□□ 0.53
PHRF1-205ENST00000533464 EFHC1Q5JVL4 640 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 MDM1Q8TC05 714 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 MARCOQ9UEW3 520 aaPredicted RBP18.38■□□□□ 0.53
PHRF1-205ENST00000533464 HOXA10P31260 410 aaPredicted RBP18.38■□□□□ 0.53
PHRF1-205ENST00000533464 VEPH1Q14D04 833 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 NOP9Q86U38 636 aaKnown RBP18.38■□□□□ 0.53
PHRF1-205ENST00000533464 ERO1BQ86YB8 467 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 CCDC124Q96CT7 223 aaKnown RBP18.38■□□□□ 0.53
PHRF1-205ENST00000533464 PCMTD2Q9NV79 361 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 PDK1Q15118 436 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 RGS9BPQ6ZS82 235 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 RAET1EQ8TD07 263 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 ASAP3Q8TDY4 903 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 GIPC2Q8TF65 315 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 KLK14Q9P0G3 267 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 KDSRQ06136 332 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 PGM5Q15124 567 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 AMHR2Q16671 573 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 MEI1Q5TIA1 1274 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 ICE2Q659A1 982 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 MPZL3Q6UWV2 235 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 TAS2R42Q7RTR8 314 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 FBXO16Q8IX29 292 aaPredicted RBP18.38■□□□□ 0.53
PHRF1-205ENST00000533464 ATPAF2Q8N5M1 289 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 ACTRT1Q8TDG2 376 aa18.38■□□□□ 0.53
PHRF1-205ENST00000533464 PABPC5Q96DU9 382 aaKnown RBP18.38■□□□□ 0.53
PHRF1-205ENST00000533464 SMAPO00193 183 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 PSTPIP1O43586 416 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 HUNKP57058 714 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 KCNT1Q5JUK3 1230 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 PPIL6Q8IXY8 311 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 ELMOD1Q8N336 334 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 RMDN2Q96LZ7 410 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 KIAA1683Q9H0B3 1180 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 SPAG6O75602 509 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 VIL1P09327 827 aaKnown RBP18.37■□□□□ 0.53
PHRF1-205ENST00000533464 TAF6P49848 677 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 POLE2P56282 527 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 STX3Q13277 289 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 ACCSLQ4AC99 568 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 PPHLN1Q8NEY8 458 aaKnown RBP18.37■□□□□ 0.53
PHRF1-205ENST00000533464 TRIM15Q9C019 465 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 KRT82Q9NSB4 513 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 AIPL1Q9NZN9 384 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 TSR3Q9UJK0 312 aaKnown RBP18.37■□□□□ 0.53
PHRF1-205ENST00000533464 HMBSP08397 361 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 SERPINB9P50453 376 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 RHBDL3P58872 404 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 CGRRF1Q99675 332 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 EGFL8Q99944 293 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 EML1O00423 815 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 ALDH18A1P54886 795 aaKnown RBP18.37■□□□□ 0.53
PHRF1-205ENST00000533464 SLC35C1Q96A29 364 aa18.37■□□□□ 0.53
PHRF1-205ENST00000533464 UBQLN1Q9UMX0 589 aaKnown RBP18.37■□□□□ 0.53
PHRF1-205ENST00000533464 ZBBXA8MT70 800 aa18.36■□□□□ 0.53
PHRF1-205ENST00000533464 SNRPAP09012 282 aaKnown RBP18.36■□□□□ 0.53
PHRF1-205ENST00000533464 PHEXP78562 749 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms