RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 BARX2Q9UMQ3 279 aaPredicted RBP19.2■□□□□ 0.66
PPP1CA-208ENST00000532446 PCDHB8Q9UN66 801 aa19.2■□□□□ 0.66
PPP1CA-208ENST00000532446 ARHGEF37A1IGU5 675 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 GFPT2O94808 682 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 KRT5P13647 590 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 USP8P40818 1118 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 ZNF132P52740 706 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 ELAVL2Q12926 359 aaKnown RBP19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 FUT10Q6P4F1 479 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 TMEM270Q6UE05 265 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 IRF2BP2Q7Z5L9 587 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 SPATA18Q8TC71 538 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 WHAMMQ8TF30 809 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 SPG21Q9NZD8 308 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 DSEQ9UL01 958 aa19.19■□□□□ 0.66
PPP1CA-208ENST00000532446 SF3B1O75533 1304 aaKnown RBP eCLIP19.19■□□□□ 0.663e-10■■■■■ 89.1
PPP1CA-208ENST00000532446 GABRDO14764 452 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 CYP26A1O43174 497 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 PTMAP06454 111 aaKnown RBP19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 FERP16591 822 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 TYMPP19971 482 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 CLCN1P35523 988 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 NDST1P52848 882 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 ASIC2Q16515 512 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 MEA1Q16626 185 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 TSR1Q2NL82 804 aaKnown RBP19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 WDR59Q6PJI9 974 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 RBBP8NLQ8NC74 664 aaPredicted RBP19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 HMGXB4Q9UGU5 601 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 NME7Q9Y5B8 376 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 PCDHA11Q9Y5I1 949 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 TIMM13Q9Y5L4 95 aaPredicted RBP19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 SZT2Q5T011 3432 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 LAMA3Q16787 3333 aa19.18■□□□□ 0.66
PPP1CA-208ENST00000532446 LINC01553A4QN01 128 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 SOX1O00570 391 aaPredicted RBP19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 SYN3O14994 580 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 MYOGP15173 224 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 FECHP22830 423 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 PPM1AP35813 382 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 GNL1P36915 607 aaPredicted RBP19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 PRKCIP41743 596 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 RAD23BP54727 409 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 ARID5AQ03989 594 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 LRIT3Q3SXY7 679 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 UNC93AQ86WB7 457 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 OSTM1Q86WC4 334 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 GPIHBP1Q8IV16 184 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 RNF168Q8IYW5 571 aaPredicted RBP19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 OR6B3Q8NGW1 331 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 TWNKQ96RR1 684 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 ELOVL4Q9GZR5 314 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 SNX25Q9H3E2 840 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 STXBP5LQ9Y2K9 1186 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 PCDHB12Q9Y5F1 795 aa19.17■□□□□ 0.66
PPP1CA-208ENST00000532446 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 CCDC172P0C7W6 258 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 FGFR3P22607 806 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 TKTP29401 623 aaKnown RBP19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 LHX1P48742 406 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 ZNF394Q53GI3 561 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 FAM171A1Q5VUB5 890 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 HGSNATQ68CP4 663 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 METTL23Q86XA0 190 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 LRRC8AQ8IWT6 810 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 TMEM169Q96HH4 297 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 VN1R3Q9BXE9 311 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 NT5C1AQ9BXI3 368 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 ZNHIT6Q9NWK9 470 aaKnown RBP19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 SERPING1P05155 500 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 LMO2P25791 158 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 BPIFB4P59827 614 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 CDK17Q00537 523 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 TAS1R1Q7RTX1 841 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 SLC47A2Q86VL8 602 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 TMEM139Q8IV31 216 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 SLC4A11Q8NBS3 891 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 TMEM176AQ96HP8 235 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 LRCH3Q96II8 777 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 ACP6Q9NPH0 428 aa19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 DDX43Q9NXZ2 648 aaKnown RBP19.16■□□□□ 0.66
PPP1CA-208ENST00000532446 PLXNA4Q9HCM2 1894 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 A8MXQ7 604 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 HCRTO43612 131 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 ARHGEF15O94989 841 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 OAZ2O95190 189 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 PAEPP09466 180 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 SKILP12757 684 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 BMPR1AP36894 532 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 YWHAHQ04917 246 aaPredicted RBP19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 PTK2Q05397 1052 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 KLHL30Q0D2K2 578 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 ORC1Q13415 861 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 OVOS1Q6IE37 1185 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 CRYBG2Q8N1P7 616 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 EPS8L1Q8TE68 723 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 CHP1Q99653 195 aa19.15■□□□□ 0.66
PPP1CA-208ENST00000532446 RTP3Q9BQQ7 232 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms