RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CES5AQ6NT32 575 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 CYP26C1Q6V0L0 522 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 SV2AQ7L0J3 742 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 RTL10Q7L3V2 364 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 USP37Q86T82 979 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 FAM186BQ8IYM0 893 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 TOP6BLQ8N6T0 577 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 KBTBD7Q8WVZ9 684 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 PKMYT1Q99640 499 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 ZCWPW1Q9H0M4 648 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 VRTNQ9H8Y1 702 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 AFF4Q9UHB7 1163 aaKnown RBP14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 DSEQ9UL01 958 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 SNX9Q9Y5X1 595 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 BDP1A6H8Y1 2624 aa14.99□□□□□ -0.01
TSPAN4-220ENST00000532375 CETN3O15182 167 aa14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 HCRTO43612 131 aa14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 POU2F2P09086 479 aa14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 PPP1R2P41236 205 aa14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 INTS8Q75QN2 995 aaKnown RBP14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 DPH6Q7L8W6 267 aa14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 GJD3Q8N144 294 aa14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 SLC7A14Q8TBB6 771 aa14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 SPATA18Q8TC71 538 aa14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 KHSRPQ92945 711 aaKnown RBP eCLIP14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 NECTIN4Q96NY8 510 aa14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 MAFFQ9ULX9 164 aa14.98□□□□□ -0.01
TSPAN4-220ENST00000532375 PSMA7O14818 248 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 N4BP1O75113 896 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 LRRN2O75325 713 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 HNRNPA1P09651 372 aaKnown RBP eCLIP14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 TRIM49P0CI25 452 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 TRIM49CP0CI26 452 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 ATICP31939 592 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 MYO1EQ12965 1108 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 RBM43Q6ZSC3 357 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 TMEM86AQ8N2M4 240 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 NELFBQ8WX92 580 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 SMG7Q92540 1137 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 ELMO3Q96BJ8 720 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 RIPOR3Q96MK2 946 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 WDR6Q9NNW5 1121 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 TMLHEQ9NVH6 421 aa14.97□□□□□ -0.01
TSPAN4-220ENST00000532375 MTMR11A4FU01 709 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 HUS1O60921 280 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 FAM163BP0C2L3 166 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 CPB1P15086 417 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 LMO2P25791 158 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 GCLMP48507 274 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 ADCY1Q08828 1119 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 NCOA4Q13772 614 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 CCDC142Q17RM4 750 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 PPM1LQ5SGD2 360 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 KLHL10Q6JEL2 608 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 ELMSAN1Q6PJG2 1045 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 POTEHQ6S545 545 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 FILIP1Q7Z7B0 1213 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 METTL23Q86XA0 190 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 ATAD1Q8NBU5 361 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 TAS1R2Q8TE23 839 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 TSG101Q99816 390 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 ACBD6Q9BR61 282 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 NUP62CLQ9H1M0 184 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 CYP4F11Q9HBI6 524 aa14.96□□□□□ -0.01
TSPAN4-220ENST00000532375 SLC16A3O15427 465 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 CCL16O15467 120 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 TACC1O75410 805 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 ASS1P00966 412 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 HLA-DRAP01903 254 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 WARSP23381 471 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 GTF2H1P32780 548 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 STX17P56962 302 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 NTHL1P78549 312 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 DUSP4Q13115 394 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 STIM1Q13586 685 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 WDR72Q3MJ13 1102 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 LIN9Q5TKA1 542 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 FAM171BQ6P995 826 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 CCDC149Q6ZUS6 474 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 GRASPQ7Z6J2 395 aaPredicted RBP14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 THEM5Q8N1Q8 247 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 TTC9BQ8N6N2 239 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 SYAP1Q96A49 352 aaPredicted RBP14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 RPGRIP1Q96KN7 1286 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 CEP63Q96MT8 703 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 PGLYRP2Q96PD5 576 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 MRPL45Q9BRJ2 306 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 SDCBP2Q9H190 292 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 HCFC1R1Q9NWW0 138 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 DDX43Q9NXZ2 648 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 CEP72Q9P209 647 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 DNMT3BQ9UBC3 853 aaKnown RBP14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 POLIQ9UNA4 740 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 CTNND2Q9UQB3 1225 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 USTQ9Y2C2 406 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 SLC27A5Q9Y2P5 690 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 INSL5Q9Y5Q6 135 aa14.95□□□□□ -0.02
TSPAN4-220ENST00000532375 PTPRDP23468 1912 aa14.94□□□□□ -0.02
TSPAN4-220ENST00000532375 MYBPHLA2RUH7 354 aa14.94□□□□□ -0.02
TSPAN4-220ENST00000532375 C2CD4DB7Z1M9 353 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms