RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	TTC9B	Q8N6N2	239 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	ST13P5	Q8NFI4	369 aa	Predicted RBP	18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	ELMO3	Q96BJ8	720 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	ZCWPW1	Q9H0M4	648 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	C11orf16	Q9NQ32	467 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	MAN1B1	Q9UKM7	699 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	FRMD4B	Q9Y2L6	1034 aa		18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	R3HCC1	Q9Y3T6	440 aa	Known RBP	18.73	■□□□□ 0.59
CTSB-223	ENST00000532370	ANK1	P16157	1881 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	MTMR11	A4FU01	709 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	SOAT2	O75908	522 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	LRG1	P02750	347 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	POU2F2	P09086	479 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	ALAD	P13716	330 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	FSHR	P23945	695 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	PMS1	P54277	932 aa	Known RBP	18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	MYL6	P60660	151 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	CLDN10	P78369	228 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	TWF1	Q12792	350 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	MYO1E	Q12965	1108 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	ADAM9	Q13443	819 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	NFIL3	Q16649	462 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	C1orf220	Q5T0J3	134 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	TDRD10	Q5VZ19	366 aa	Known RBP	18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	CENPP	Q6IPU0	288 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	THEM5	Q8N1Q8	247 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	ITFG1	Q8TB96	612 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	ACSF2	Q96CM8	615 aa	Predicted RBP	18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	SMOC2	Q9H3U7	446 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	CEP72	Q9P209	647 aa		18.72	■□□□□ 0.59
CTSB-223	ENST00000532370	SCN1A	P35498	2009 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	NRG2	O14511	850 aa	Predicted RBP	18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	C4BPA	P04003	597 aa	Known RBP	18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	RHO	P08100	348 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	BMP6	P22004	513 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	ACAT1	P24752	427 aa	Known RBP	18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	CCDC142	Q17RM4	750 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	PABPC1L	Q4VXU2	614 aa	Known RBP	18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	LIMS2	Q7Z4I7	341 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	ADGRF2	Q8IZF7	708 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	PLCD3	Q8N3E9	789 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	TOP6BL	Q8N6T0	577 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	XYLT2	Q9H1B5	865 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	TMLHE	Q9NVH6	421 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	MAFF	Q9ULX9	164 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	YIPF1	Q9Y548	306 aa		18.71	■□□□□ 0.59
CTSB-223	ENST00000532370	BIN1	O00499	593 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	PHACTR2	O75167	634 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	VNN1	O95497	513 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	CD44	P16070	742 aa	Known RBP	18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	RPL13	P26373	211 aa	Known RBP	18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	BIRC3	Q13489	604 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	TRPC3	Q13507	836 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	CAMK4	Q16566	473 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	PTPN21	Q16825	1174 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	SLC5A9	Q2M3M2	681 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	COBLL1	Q53SF7	1204 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	HS6ST3	Q8IZP7	471 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	ADSSL1	Q8N142	457 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	TMEM86A	Q8N2M4	240 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	TMC2	Q8TDI7	906 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	KBTBD7	Q8WVZ9	684 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	RSAD2	Q8WXG1	361 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	CORO1B	Q9BR76	489 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	DDX43	Q9NXZ2	648 aa	Known RBP	18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	EPS15L1	Q9UBC2	864 aa		18.7	■□□□□ 0.58
CTSB-223	ENST00000532370	TRIM49B	A6NDI0	452 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	GABRD	O14764	452 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	TRIM49	P0CI25	452 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	TRIM49C	P0CI26	452 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	LAMP2	P13473	410 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	LMO2	P25791	158 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	VAMP7	P51809	220 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	ZXDA	P98168	799 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	EDRF1	Q3B7T1	1238 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	WDR72	Q3MJ13	1102 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	ANKRD40	Q6AI12	368 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	POTEH	Q6S545	545 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	FAM186B	Q8IYM0	893 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	ING5	Q8WYH8	240 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	EDA	Q92838	391 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	FGF13	Q92913	245 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	TCEAL4	Q96EI5	215 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	MMS19	Q96T76	1030 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	MRPL45	Q9BRJ2	306 aa	Known RBP	18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	C1QTNF1	Q9BXJ1	281 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	DNAJC25	Q9H1X3	360 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	KCNK12	Q9HB15	430 aa		18.69	■□□□□ 0.58
CTSB-223	ENST00000532370	MAPK13	O15264	365 aa		18.68	■□□□□ 0.58
CTSB-223	ENST00000532370	ATP2C2	O75185	946 aa		18.68	■□□□□ 0.58
CTSB-223	ENST00000532370	PTPN2	P17706	415 aa		18.68	■□□□□ 0.58
CTSB-223	ENST00000532370	PSMC2	P35998	433 aa	Known RBP	18.68	■□□□□ 0.58
CTSB-223	ENST00000532370	CCR2	P41597	374 aa		18.68	■□□□□ 0.58
CTSB-223	ENST00000532370	AP3M2	P53677	418 aa		18.68	■□□□□ 0.58
CTSB-223	ENST00000532370	TSPY1	Q01534	308 aa		18.68	■□□□□ 0.58
CTSB-223	ENST00000532370	NCOA4	Q13772	614 aa		18.68	■□□□□ 0.58
CTSB-223	ENST00000532370	SV2A	Q7L0J3	742 aa		18.68	■□□□□ 0.58
CTSB-223	ENST00000532370	IPO9	Q96P70	1041 aa	Known RBP	18.68	■□□□□ 0.58
CTSB-223	ENST00000532370	PKMYT1	Q99640	499 aa		18.68	■□□□□ 0.58

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