RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SELPP16109 830 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SLC12A1Q13621 1099 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 NOMO2Q5JPE7 1267 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 ILDR2Q71H61 639 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 SPIRE2Q8WWL2 714 aa8.38□□□□□ -1.07
CTNND1-230ENST00000532245 GAS2L1Q99501 681 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-230ENST00000532245 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 PPP1R11O60927 126 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 MAFO75444 373 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 PRAMEP78395 509 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 ZNF177Q13360 481 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 KCNK18Q7Z418 384 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 TNS4Q8IZW8 715 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 GPR20Q99678 358 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 KCNMB3Q9NPA1 279 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.37□□□□□ -1.075e-6■■■□□ 17.3
CTNND1-230ENST00000532245 AFF4Q9UHB7 1163 aaKnown RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 FAM208AQ9UK61 1670 aaKnown RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 PHRF1Q9P1Y6 1649 aaKnown RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 UBA6A0AVT1 1052 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 TISP43B9A030 160 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 TREHO43280 583 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 VDRP11473 427 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 CCL5P13501 91 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 NDUFV1P49821 464 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 CRYBB1P53674 252 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 GALCP54803 685 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 ITGB3BPQ13352 177 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 TMED2Q15363 201 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 UGCGQ16739 394 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 CENPUQ71F23 418 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 CTU1Q7Z7A3 348 aaKnown RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 EFHBQ8N7U6 833 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 SLC35G2Q8TBE7 412 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 AFAP1L1Q8TED9 768 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 C1orf54Q8WWF1 131 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 CIPCQ9C0C6 399 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 SOWAHBA6NEL2 793 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 E5RI56 91 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 ATP9BO43861 1147 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 AKAP3O75969 853 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 ENDOD1O94919 500 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 ACRP10323 421 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 SV2AQ7L0J3 742 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 ZNF384Q8TF68 577 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 UCMAQ8WVF2 138 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 HAS1Q92839 578 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 ERLEC1Q96DZ1 483 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 MAGEB5Q9BZ81 275 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 SEMA6BQ9H3T3 888 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 CATSPERBQ9H7T0 1116 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 CISHQ9NSE2 258 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 RNF186Q9NXI6 227 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.37□□□□□ -1.073e-7■■□□□ 14.4
CTNND1-230ENST00000532245 PCDHB8Q9UN66 801 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 FRMPD4Q14CM0 1322 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 RPTORQ8N122 1335 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 F5H5T6 163 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 GNRH1P01148 92 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 SLCO1A2P46721 670 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 PCSK7Q16549 785 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 HP1BP3Q5SSJ5 553 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-230ENST00000532245 ZPBP2Q6X784 338 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 CCDC121Q6ZUS5 278 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 VPS39Q96JC1 886 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 WNT8AQ9H1J5 351 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 OLFML3Q9NRN5 406 aa8.37□□□□□ -1.07
CTNND1-230ENST00000532245 KPNA7A9QM74 516 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 ANKRD63C9JTQ0 380 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 CD44P16070 742 aaKnown RBP8.36□□□□□ -1.07
CTNND1-230ENST00000532245 BCAT1P54687 386 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 EIF3EP60228 445 aaKnown RBP8.36□□□□□ -1.07
CTNND1-230ENST00000532245 ZNF200P98182 395 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-230ENST00000532245 PLD1Q13393 1074 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 ARHGEF7Q14155 803 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 FRA10AC1Q70Z53 315 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 CDC26Q8NHZ8 85 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 ZNF296Q8WUU4 475 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-230ENST00000532245 SNX19Q92543 992 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 TMEM176AQ96HP8 235 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 CFAP57Q96MR6 1250 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 MTMR9Q96QG7 549 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 EDEM3Q9BZQ6 932 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 SAYSD1Q9NPB0 183 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 CCDC78A2IDD5 438 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 KCNN4O15554 427 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 MAP3K13O43283 966 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 SGPL1O95470 568 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 FGRP09769 529 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 EPHB2P29323 1055 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 MAP2K2P36507 400 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 TKTL1P51854 596 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 ZNF131P52739 623 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 DHX9Q08211 1270 aaKnown RBP8.36□□□□□ -1.07
CTNND1-230ENST00000532245 TMEM119Q4V9L6 283 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 LRRC8DQ7L1W4 858 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 SDCCAG8Q86SQ7 713 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-230ENST00000532245 TMC2Q8TDI7 906 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 C7orf43Q8WVR3 580 aa8.36□□□□□ -1.07
CTNND1-230ENST00000532245 PBXIP1Q96AQ6 731 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms