RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ERVK-21P61565 698 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 NOP14P78316 857 aaKnown RBP13.42□□□□□ -0.26
COPB1-208ENST00000532088 UBE3AQ05086 875 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 ZNF667Q5HYK9 610 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 ENOSF1Q7L5Y1 443 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 LIMS2Q7Z4I7 341 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 RNF168Q8IYW5 571 aaPredicted RBP13.42□□□□□ -0.26
COPB1-208ENST00000532088 TTC39CQ8N584 583 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 TOP6BLQ8N6T0 577 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 LRRN4Q8WUT4 740 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 SEMA4DQ92854 862 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 IGSF21Q96ID5 467 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 SUSD3Q96L08 255 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 NT5C1BQ96P26 610 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 TGS1Q96RS0 853 aaKnown RBP13.42□□□□□ -0.26
COPB1-208ENST00000532088 PAAF1Q9BRP4 392 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 PBX4Q9BYU1 374 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 INTS2Q9H0H0 1204 aaKnown RBP13.42□□□□□ -0.26
COPB1-208ENST00000532088 CYP3A43Q9HB55 503 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 EVA1BQ9NVM1 165 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 SPG21Q9NZD8 308 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 IFNKQ9P0W0 207 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 FBXL5Q9UKA1 691 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 LZTS1Q9Y250 596 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 SIK3Q9Y2K2 1263 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 NUB1Q9Y5A7 615 aa13.42□□□□□ -0.26
COPB1-208ENST00000532088 ITIH6Q6UXX5 1313 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 LCHNA4D1U4 455 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 PPEF2O14830 753 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 SYN3O14994 580 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 TACC1O75410 805 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 CYP11A1P05108 521 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 CA3P07451 260 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 CCNYL3P0C7X3 344 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 TYMPP19971 482 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 TNNC1P63316 161 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 GCNT1Q02742 428 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 KCNMA1Q12791 1236 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 FIGNQ5HY92 759 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 TRIM65Q6PJ69 517 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 DDX53Q86TM3 631 aaKnown RBP13.41□□□□□ -0.26
COPB1-208ENST00000532088 C3orf58Q8NDZ4 430 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 TMEM169Q96HH4 297 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 MRFAP1L1Q96HT8 127 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 FAM84AQ96KN4 292 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 XPO4Q9C0E2 1151 aaKnown RBP13.41□□□□□ -0.26
COPB1-208ENST00000532088 NIF3L1Q9GZT8 377 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 APEX2Q9UBZ4 518 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 DSEQ9UL01 958 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 YBX2Q9Y2T7 364 aaKnown RBP13.41□□□□□ -0.26
COPB1-208ENST00000532088 PRG3Q9Y2Y8 225 aaPredicted RBP13.41□□□□□ -0.26
COPB1-208ENST00000532088 FCF1Q9Y324 198 aaKnown RBP13.41□□□□□ -0.26
COPB1-208ENST00000532088 KIAA1671Q9BY89 1806 aa13.41□□□□□ -0.26
COPB1-208ENST00000532088 TNRC18O15417 2968 aaPredicted RBP13.41□□□□□ -0.26
COPB1-208ENST00000532088 TEX33O43247 280 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 F12P00748 615 aaPredicted RBP13.4□□□□□ -0.26
COPB1-208ENST00000532088 SLC9A1P19634 815 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 TAP1Q03518 808 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 KRT17Q04695 432 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 SYCP1Q15431 976 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 DPY19L2P1Q6NXN4 242 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.4□□□□□ -0.26
COPB1-208ENST00000532088 TMEM86AQ8N2M4 240 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 APPL2Q8NEU8 664 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 CRACR2AQ9BSW2 395 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 C11orf84Q9BUA3 381 aaPredicted RBP13.4□□□□□ -0.26
COPB1-208ENST00000532088 NUP58Q9BVL2 599 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 HERC2P3Q9BVR0 1158 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 OXCT2Q9BYC2 517 aaPredicted RBP13.4□□□□□ -0.26
COPB1-208ENST00000532088 BCO2Q9BYV7 579 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 EDEM3Q9BZQ6 932 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 TRIM5Q9C035 493 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 GRPEL1Q9HAV7 217 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 APOBEC3GQ9HC16 384 aaKnown RBP13.4□□□□□ -0.26
COPB1-208ENST00000532088 GBF1Q92538 1859 aa13.4□□□□□ -0.26
COPB1-208ENST00000532088 CEP290O15078 2479 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 SCN1AP35498 2009 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 HUS1O60921 280 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 SOD2P04179 222 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 ODC1P11926 461 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 FGFR3P22607 806 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 CTNNB1P35222 781 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 ASPAP45381 313 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 MRE11P49959 708 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 YWHAEP62258 255 aaKnown RBP13.39□□□□□ -0.27
COPB1-208ENST00000532088 CUL2Q13617 745 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 TIGD5Q53EQ6 642 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 KLHDC7AQ5VTJ3 777 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 SCARA3Q6AZY7 606 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 TIFAQ96CG3 184 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 SENP8Q96LD8 212 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 SLC28A3Q9HAS3 691 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 SIX2Q9NPC8 291 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 CACNG4Q9UBN1 327 aa13.39□□□□□ -0.27
COPB1-208ENST00000532088 PUF60Q9UHX1 559 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms