RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 STXBP5Q5T5C0 1151 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 CENPPQ6IPU0 288 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 CC2D1AQ6P1N0 951 aaPredicted RBP12.54□□□□□ -0.4
CMTM1-215ENST00000531885 TXNDC11Q6PKC3 985 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 C1orf186Q6ZWK4 172 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 METTL23Q86XA0 190 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 GPIHBP1Q8IV16 184 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 KCTD17Q8N5Z5 321 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 FBXO18Q8NFZ0 1043 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 RSPRY1Q96DX4 576 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 ZFYVE19Q96K21 471 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 DNAJC25Q9H1X3 360 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 KCND2Q9NZV8 630 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 DSEQ9UL01 958 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 PCDHGA5Q9Y5G8 931 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 NCANO14594 1321 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 SDK1Q7Z5N4 2213 aa12.54□□□□□ -0.4
CMTM1-215ENST00000531885 TTC26A0AVF1 554 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 SFI1A8K8P3 1242 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 HNRNPDLO14979 420 aaKnown RBP12.53□□□□□ -0.4
CMTM1-215ENST00000531885 EPN2O95208 641 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
CMTM1-215ENST00000531885 DDX6P26196 483 aaKnown RBP eCLIP12.53□□□□□ -0.4
CMTM1-215ENST00000531885 WEE1P30291 646 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 AARSP49588 968 aaKnown RBP eCLIP12.53□□□□□ -0.4
CMTM1-215ENST00000531885 RAD51AP2Q09MP3 1159 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 SMARCB1Q12824 385 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
CMTM1-215ENST00000531885 SF3A2Q15428 464 aaKnown RBP12.53□□□□□ -0.4
CMTM1-215ENST00000531885 ELF2Q15723 593 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 STPG1Q5TH74 334 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 GAREM2Q75VX8 874 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 CCDC83Q8IWF9 413 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 CD302Q8IX05 232 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 THEM5Q8N1Q8 247 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 CAMKK1Q8N5S9 505 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 ATAD1Q8NBU5 361 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 TMEM161BQ8NDZ6 487 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 LRRC3Q9BY71 257 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 KIF9Q9HAQ2 790 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 LIMCH1Q9UPQ0 1083 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 CACNA1GO43497 2377 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 USP24Q9UPU5 2620 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
CMTM1-215ENST00000531885 OGTO15294 1046 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 PMLP29590 882 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 ABCD1P33897 745 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 PRPHP41219 470 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 CYP4F8P98187 520 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 TNK2Q07912 1038 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 MAPK7Q13164 816 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 NBR1Q14596 966 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 SLC39A12Q504Y0 691 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 N4BP2L1Q5TBK1 243 aaPredicted RBP12.52□□□□□ -0.41
CMTM1-215ENST00000531885 RNF43Q68DV7 783 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 C4orf32Q8N8J7 132 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 CCDC26Q8TAB7 109 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 C2orf15Q8WU43 125 aaKnown RBP12.52□□□□□ -0.41
CMTM1-215ENST00000531885 SENP8Q96LD8 212 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 CRISPLD1Q9H336 500 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 VPS45Q9NRW7 570 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 KIF3AQ9Y496 699 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 ASPMQ8IZT6 3477 aa12.52□□□□□ -0.41
CMTM1-215ENST00000531885 PP2D1A8MPX8 630 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 EXTL3O43909 919 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 SOAT2O75908 522 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 RHOBTB1O94844 696 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 VNN2O95498 520 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 PRAMEF12O95522 483 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 DRD1P21728 446 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 MPLP40238 635 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 PXNP49023 591 aaPredicted RBP12.51□□□□□ -0.41
CMTM1-215ENST00000531885 LILRA4P59901 499 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 SHC2P98077 582 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 RUNX3Q13761 415 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 CCDC6Q16204 474 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 FBXO43Q4G163 708 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 KBTBD6Q86V97 674 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 CMTM8Q8IZV2 173 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
CMTM1-215ENST00000531885 SPPL2BQ8TCT7 592 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 LPIN3Q9BQK8 851 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 MKNK1Q9BUB5 465 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 GKN1Q9NS71 199 aa12.51□□□□□ -0.41
CMTM1-215ENST00000531885 MEFVO15553 781 aaPredicted RBP12.5□□□□□ -0.41
CMTM1-215ENST00000531885 KRT18P05783 430 aaKnown RBP12.5□□□□□ -0.41
CMTM1-215ENST00000531885 CDC25AP30304 524 aa12.5□□□□□ -0.41
CMTM1-215ENST00000531885 TMEM132DQ14C87 1099 aa12.5□□□□□ -0.41
CMTM1-215ENST00000531885 PDGFRLQ15198 375 aa12.5□□□□□ -0.41
CMTM1-215ENST00000531885 ZBTB6Q15916 424 aa12.5□□□□□ -0.41
CMTM1-215ENST00000531885 ENOX2Q16206 610 aaKnown RBP12.5□□□□□ -0.41
CMTM1-215ENST00000531885 TMEM196Q5HYL7 178 aa12.5□□□□□ -0.41
CMTM1-215ENST00000531885 DAB2IPQ5VWQ8 1189 aa12.5□□□□□ -0.41
CMTM1-215ENST00000531885 SPATA1Q5VX52 437 aa12.5□□□□□ -0.41
CMTM1-215ENST00000531885 C11orf74Q86VG3 221 aa12.5□□□□□ -0.41
CMTM1-215ENST00000531885 DCP1BQ8IZD4 617 aaKnown RBP12.5□□□□□ -0.41
CMTM1-215ENST00000531885 MRPS31Q92665 395 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms