RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 TRAPPC10P48553 1259 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 GPC3P51654 580 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 CRYBB1P53674 252 aaPredicted RBP7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 KRT17Q04695 432 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 PCDH1Q08174 1060 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 SMC1AQ14683 1233 aaKnown RBP7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 ZNF423Q2M1K9 1284 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 LONRF3Q496Y0 759 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 XKR9Q5GH70 373 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 SPECC1Q5M775 1068 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 KIAA1841Q6NSI8 718 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 RHPN2Q8IUC4 686 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 VPS52Q8N1B4 723 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 LRRC43Q8N309 656 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 BCL7CQ8WUZ0 217 aaPredicted RBP7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 PRPF31Q8WWY3 499 aaKnown RBP7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 FDXACB1Q9BRP7 624 aaPredicted RBP7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 CEP41Q9BYV8 373 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 CLEC4MQ9H2X3 399 aaPredicted RBP7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 DHX33Q9H6R0 707 aaKnown RBP7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 KCNK12Q9HB15 430 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 XPNPEP1Q9NQW7 623 aa7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 SUCLA2Q9P2R7 463 aaPredicted RBP7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 MAP1BP46821 2468 aaKnown RBP7.75□□□□□ -1.17
TRIM53CP-201ENST00000531490 ATRXP46100 2492 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 FNDC1Q4ZHG4 1894 aaPredicted RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 VPS37CA5D8V6 355 aaPredicted RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 N4BP1O75113 896 aaKnown RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 LYPLA2O95372 231 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 RPLP2P05387 115 aaKnown RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 DCNP07585 359 aaKnown RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 SRGAP2CP0DJJ0 459 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 EIF4BP23588 611 aaKnown RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 RPA1P27694 616 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 RARRES1P49788 294 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 TDGQ13569 410 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 PDIA5Q14554 519 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 MAEAQ7L5Y9 396 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 OTUD6AQ7L8S5 288 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 ECHDC2Q86YB7 292 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 ARMC10Q8N2F6 343 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 EPS8L3Q8TE67 593 aaKnown RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 SLC22A17Q8WUG5 538 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 SNX21Q969T3 373 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 INTS4Q96HW7 963 aaKnown RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 FAM46AQ96IP4 442 aaKnown RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 MMTAG2Q9BU76 263 aaKnown RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 RUSC1Q9BVN2 902 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 VN1R3Q9BXE9 311 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 MINDY3Q9H8M7 445 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 IFT122Q9HBG6 1241 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 LRWD1Q9UFC0 647 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 CA14Q9ULX7 337 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 NOL7Q9UMY1 257 aaKnown RBP7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 KIF3AQ9Y496 699 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 USP24Q9UPU5 2620 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 PLXNA4Q9HCM2 1894 aa7.74□□□□□ -1.17
TRIM53CP-201ENST00000531490 LOC100289279A0A1B0GTE1 492 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 B4GALT3O60512 393 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 DKC1O60832 514 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 GADD45BO75293 160 aaPredicted RBP7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 LRRN2O75325 713 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 XRCC6P12956 609 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 DARSP14868 501 aaKnown RBP7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 ITPKAP23677 461 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 PPM1AP35813 382 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 DNM2P50570 870 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 POLGP54098 1239 aaPredicted RBP7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 BCAR1P56945 870 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 GSTM4Q03013 218 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 GRIN1Q05586 938 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 LAMTOR4Q0VGL1 99 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 ORC2Q13416 577 aaPredicted RBP7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 PUM1Q14671 1186 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 RILPL1Q5EBL4 403 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 CABP7Q86V35 215 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 ABI1Q8IZP0 508 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 IGSF22Q8N9C0 903 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 MAP7D2Q96T17 732 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 PLIN2Q99541 437 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 RTP3Q9BQQ7 232 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 POLR3CQ9BUI4 534 aaPredicted RBP7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 ZBP1Q9H171 429 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 ELAC1Q9H777 363 aaKnown RBP7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 TBC1D17Q9HA65 648 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 GPRC5CQ9NQ84 441 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 ANKEF1Q9NU02 776 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 DLL3Q9NYJ7 618 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 RALYQ9UKM9 306 aaKnown RBP7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 DUSP12Q9UNI6 340 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 CLIC4Q9Y696 253 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 CEP295Q9C0D2 2601 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 MYO10Q9HD67 2058 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 KIAA1671Q9BY89 1806 aa7.73□□□□□ -1.17
TRIM53CP-201ENST00000531490 MEGF11A6BM72 1044 aa7.72□□□□□ -1.17
TRIM53CP-201ENST00000531490 MEIS3P2A8K0S8 358 aa7.72□□□□□ -1.17
TRIM53CP-201ENST00000531490 E9PMD0 336 aa7.72□□□□□ -1.17
TRIM53CP-201ENST00000531490 ZC3H11AO75152 810 aaKnown RBP eCLIP7.72□□□□□ -1.17
TRIM53CP-201ENST00000531490 DLGAP3O95886 979 aa7.72□□□□□ -1.17
TRIM53CP-201ENST00000531490 SSBP05455 408 aaKnown RBP eCLIP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms