RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 LHX1P48742 406 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 GCNT1Q02742 428 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 CUL2Q13617 745 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 SYCP1Q15431 976 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 DPY19L2P1Q6NXN4 242 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 SARM1Q6SZW1 724 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 PRSS55Q6UWB4 352 aaPredicted RBP18.12■□□□□ 0.49
SF3B2-211ENST00000531041 SCARA5Q6ZMJ2 495 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 ARHGEF19Q8IW93 802 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 PPM1KQ8N3J5 372 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 MRPL43Q8N983 215 aaKnown RBP18.12■□□□□ 0.49
SF3B2-211ENST00000531041 FAM81BQ96LP2 452 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 OXCT2Q9BYC2 517 aaPredicted RBP18.12■□□□□ 0.49
SF3B2-211ENST00000531041 SDCBP2Q9H190 292 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 SMYD3Q9H7B4 428 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 PLCB1Q9NQ66 1216 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 FNIP2Q9P278 1114 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 MTRRQ9UBK8 725 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 BACE2Q9Y5Z0 518 aa18.12■□□□□ 0.49
SF3B2-211ENST00000531041 CDH23Q9H251 3354 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 C2CD2LO14523 706 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 WEE2P0C1S8 567 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 POU3F3P20264 500 aaPredicted RBP18.11■□□□□ 0.49
SF3B2-211ENST00000531041 IRS1P35568 1242 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 FXR1P51114 621 aaKnown RBP eCLIP18.11■□□□□ 0.498e-6■■■□□ 16.4
SF3B2-211ENST00000531041 CDH8P55286 799 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 CREMQ03060 361 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 PSMD5Q16401 504 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 ZNF280DQ6N043 979 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 THEM5Q8N1Q8 247 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 TTC39CQ8N584 583 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 MICAL1Q8TDZ2 1067 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 AUTS2Q8WXX7 1259 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 JAKMIP2Q96AA8 810 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 MRPL45Q9BRJ2 306 aaKnown RBP18.11■□□□□ 0.49
SF3B2-211ENST00000531041 XPO4Q9C0E2 1151 aaKnown RBP18.11■□□□□ 0.49
SF3B2-211ENST00000531041 RXFP1Q9HBX9 757 aa18.11■□□□□ 0.49
SF3B2-211ENST00000531041 PRRC2BQ5JSZ5 2229 aaKnown RBP18.1■□□□□ 0.49
SF3B2-211ENST00000531041 A0A1W2PQC6 194 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 C2orf71A6NGG8 1288 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 CBFA2T2O43439 604 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 TPM3P06753 285 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 GNL1P36915 607 aaPredicted RBP18.1■□□□□ 0.49
SF3B2-211ENST00000531041 RAP1GAPP47736 663 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 APBA1Q02410 837 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 INCA1Q0VD86 236 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 CTXN3Q4LDR2 81 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 KLHDC7AQ5VTJ3 777 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 PLPP4Q5VZY2 271 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 RRAGAQ7L523 313 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 ENOSF1Q7L5Y1 443 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 FAM161BQ96MY7 647 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 ARID3AQ99856 593 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 RTP3Q9BQQ7 232 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 LSM14BQ9BX40 385 aaKnown RBP18.1■□□□□ 0.49
SF3B2-211ENST00000531041 UBE2TQ9NPD8 197 aaPredicted RBP18.1■□□□□ 0.49
SF3B2-211ENST00000531041 DDX43Q9NXZ2 648 aaKnown RBP18.1■□□□□ 0.49
SF3B2-211ENST00000531041 DAAM1Q9Y4D1 1078 aa18.1■□□□□ 0.49
SF3B2-211ENST00000531041 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.09■□□□□ 0.49
SF3B2-211ENST00000531041 HIDE1A8MVS5 230 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 RFX1P22670 979 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 KLK7P49862 253 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 YWHAEP62258 255 aaKnown RBP18.09■□□□□ 0.49
SF3B2-211ENST00000531041 SMYD5Q6GMV2 418 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 OSTM1Q86WC4 334 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 OR6B3Q8NGW1 331 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 KREMEN1Q96MU8 473 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 CLSTN3Q9BQT9 956 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 ACBD6Q9BR61 282 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 SNX25Q9H3E2 840 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 CISHQ9NSE2 258 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 FBXL5Q9UKA1 691 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 BARX2Q9UMQ3 279 aaPredicted RBP18.09■□□□□ 0.49
SF3B2-211ENST00000531041 STXBP5LQ9Y2K9 1186 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 NME7Q9Y5B8 376 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 PCDHGC5Q9Y5F6 944 aa18.09■□□□□ 0.49
SF3B2-211ENST00000531041 OR6C75A6NL08 312 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 AP5Z1O43299 807 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 NOL4O94818 638 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 CNPP09543 421 aaKnown RBP18.08■□□□□ 0.49
SF3B2-211ENST00000531041 UCHL3P15374 230 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 PCSK1P29120 753 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 PBX1P40424 430 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 MFAP3P55082 362 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 PLCB2Q00722 1185 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 SLC8B1Q6J4K2 584 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 GJB7Q6PEY0 223 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 RSPO2Q6UXX9 243 aaPredicted RBP18.08■□□□□ 0.49
SF3B2-211ENST00000531041 UNC93AQ86WB7 457 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 UBR7Q8N806 425 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 KAT5Q92993 513 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 PCMTD1Q96MG8 357 aaPredicted RBP18.08■□□□□ 0.49
SF3B2-211ENST00000531041 EMILIN2Q9BXX0 1053 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 GANQ9H2C0 597 aa18.08■□□□□ 0.49
SF3B2-211ENST00000531041 FAM207AQ9NSI2 230 aaPredicted RBP18.08■□□□□ 0.49
SF3B2-211ENST00000531041 SZT2Q5T011 3432 aa18.08■□□□□ 0.48
SF3B2-211ENST00000531041 TEX28O15482 410 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 CILPO75339 1184 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 CSPG5O95196 566 aa18.07■□□□□ 0.48
SF3B2-211ENST00000531041 RPL17P18621 184 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms