RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 TMEM161AQ9NX61 479 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 GDAP2Q9NXN4 497 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 ADAMTS1Q9UHI8 967 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 NAGPAQ9UK23 515 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 AJAP1Q9UKB5 411 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-228ENST00000531007 AGAP1Q9UPQ3 857 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 PCDHA13Q9Y5I0 950 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 UMODL1Q5DID0 1318 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 ARL5CA6NH57 179 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 C9IYK1 514 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 CYP26A1O43174 497 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 MED7O43513 233 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 EFCAB14O75071 495 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 DXOO77932 396 aaKnown RBP10.53□□□□□ -0.72
CTNND1-228ENST00000531007 CLSTN1O94985 981 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 PFKMP08237 780 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 PLEKP08567 350 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-228ENST00000531007 USP8P40818 1118 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 ASPAP45381 313 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 TAF6P49848 677 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 ZNF132P52740 706 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 TLE2Q04725 743 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 INCA1Q0VD86 236 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 FAAP100Q0VG06 881 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 STILQ15468 1287 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 ALKBH5Q6P6C2 394 aaKnown RBP10.53□□□□□ -0.72
CTNND1-228ENST00000531007 GLB1LQ6UWU2 654 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 RETREG3Q86VR2 466 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 UNC93AQ86WB7 457 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 URGCPQ8TCY9 931 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 EPS8L1Q8TE68 723 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 TRIM11Q96F44 468 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 ZMAT2Q96NC0 199 aaKnown RBP10.53□□□□□ -0.72
CTNND1-228ENST00000531007 APOL6Q9BWW8 343 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 CISHQ9NSE2 258 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 TRMT1Q9NXH9 659 aaKnown RBP10.53□□□□□ -0.72
CTNND1-228ENST00000531007 NOCTQ9UK39 431 aaKnown RBP10.53□□□□□ -0.72
CTNND1-228ENST00000531007 NENFQ9UMX5 172 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 HES2Q9Y543 173 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 PCDHB4Q9Y5E5 795 aa10.53□□□□□ -0.72
CTNND1-228ENST00000531007 PDCD11Q14690 1871 aaKnown RBP10.53□□□□□ -0.72
CTNND1-228ENST00000531007 A0A087X0T9 212 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 A0A0A6YYK5 440 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-228ENST00000531007 ZBTB24O43167 697 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-228ENST00000531007 RTN2O75298 545 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 TACC1O75410 805 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 LSM8O95777 96 aaKnown RBP10.52□□□□□ -0.73
CTNND1-228ENST00000531007 MYCP01106 439 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-228ENST00000531007 CLTBP09497 229 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 FAM228BP0C875 321 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 ETF1P62495 437 aaKnown RBP10.52□□□□□ -0.73
CTNND1-228ENST00000531007 GFPT1Q06210 699 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-228ENST00000531007 MBTPS1Q14703 1052 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 TRIM60Q495X7 471 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 CCDC122Q5T0U0 273 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 SPOPLQ6IQ16 392 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 TMEM270Q6UE05 265 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 AGMOQ6ZNB7 445 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 TOP6BLQ8N6T0 577 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 RBBP8NLQ8NC74 664 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-228ENST00000531007 KAT5Q92993 513 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 VCPIP1Q96JH7 1222 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 DESI2Q9BSY9 194 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 ZNF518BQ9C0D4 1074 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 TBX21Q9UL17 535 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 BARX2Q9UMQ3 279 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-228ENST00000531007 PAXBP1Q9Y5B6 917 aa10.52□□□□□ -0.73
CTNND1-228ENST00000531007 ANKRD62A6NC57 917 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 KPNA7A9QM74 516 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 DDX3XO00571 662 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTNND1-228ENST00000531007 PTGESO14684 152 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 KIAA0355O15063 1070 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 MGEA5O60502 916 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 HUS1O60921 280 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 NBNO60934 754 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 CILPO75339 1184 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 KIF4AO95239 1232 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 H2AFZP0C0S5 128 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 MYBL1P10243 752 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 TNNT1P13805 278 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 NDUFV2P19404 249 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 GNA15P30679 374 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 PRR20EP86478 221 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 PRR20CP86479 221 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 PRR20DP86480 221 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 PRR20BP86481 221 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 PRR20AP86496 221 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 TUSC3Q13454 348 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 TUBB2AQ13885 445 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 TCEAL1Q15170 157 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 DNTTIP2Q5QJE6 756 aaKnown RBP10.51□□□□□ -0.73
CTNND1-228ENST00000531007 CNKSR3Q6P9H4 555 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-228ENST00000531007 H2AFVQ71UI9 128 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 LIMS2Q7Z4I7 341 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 SLC47A2Q86VL8 602 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 RPUSD2Q8IZ73 545 aaKnown RBP10.51□□□□□ -0.73
CTNND1-228ENST00000531007 TMEM86AQ8N2M4 240 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 ACRBPQ8NEB7 543 aa10.51□□□□□ -0.73
CTNND1-228ENST00000531007 GSTCDQ8NEC7 633 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms