RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 OR10T2Q8NGX3 314 aa17.12■□□□□ 0.33
CHMP4A-204ENST00000530996 NELL1Q92832 810 aa17.12■□□□□ 0.33
CHMP4A-204ENST00000530996 ZFYVE19Q96K21 471 aa17.12■□□□□ 0.33
CHMP4A-204ENST00000530996 C8orf33Q9H7E9 229 aaPredicted RBP17.12■□□□□ 0.33
CHMP4A-204ENST00000530996 BLOC1S4Q9NUP1 217 aa17.12■□□□□ 0.33
CHMP4A-204ENST00000530996 CPSF3Q9UKF6 684 aaKnown RBP17.12■□□□□ 0.33
CHMP4A-204ENST00000530996 DSEQ9UL01 958 aa17.12■□□□□ 0.33
CHMP4A-204ENST00000530996 COL4A2P08572 1712 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 VPS37CA5D8V6 355 aaPredicted RBP17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 TISP43B9A030 160 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 ARNTLO00327 626 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 CD2BP2O95400 341 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 PAX3P23760 479 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 CDC25CP30307 473 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 CXCL12P48061 93 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 TAF6P49848 677 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 FCHO2Q0JRZ9 810 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 LARP1BQ659C4 914 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 HEATR6Q6AI08 1181 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 SLC39A4Q6P5W5 647 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 Q6ZS52 159 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 GAREM2Q75VX8 874 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 DNAJB7Q7Z6W7 309 aaPredicted RBP17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 ZNF687Q8N1G0 1237 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 THEM5Q8N1Q8 247 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 LRRC15Q8TF66 581 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 LRRC3Q9BY71 257 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 AGO2Q9UKV8 859 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 DERAQ9Y315 318 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 PDCD11Q14690 1871 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 FANCMQ8IYD8 2048 aa17.11■□□□□ 0.33
CHMP4A-204ENST00000530996 TICRRQ7Z2Z1 1910 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 PRR5-ARHGAP8B1AHC4 643 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 SPECC1L-ADORA2AF8WAN1 911 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 PRAMEF12O95522 483 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 CHRNB1P11230 501 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 CTHP32929 405 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 TUFMP49411 452 aaKnown RBP17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 ARHGAP8P85298 464 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 GRIN1Q05586 938 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 SPEM2Q0P670 501 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 ARHGAP29Q52LW3 1261 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 ZC2HC1CQ53FD0 456 aaPredicted RBP17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 LAIR1Q6GTX8 287 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 SLFN12LQ6IEE8 588 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 BRAPQ7Z569 592 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 SFR1Q86XK3 245 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 SPEM1Q8N4L4 309 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 GIPC2Q8TF65 315 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 POMGNT1Q8WZA1 660 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 ZNF560Q96MR9 790 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 GTSE1Q9NYZ3 720 aa17.1■□□□□ 0.33
CHMP4A-204ENST00000530996 CHURC1-FNTBB4DL54 471 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 ANKRD63C9JTQ0 380 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 CYB561D2O14569 222 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 TDGF1P13385 188 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 ATF6P18850 670 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 FNTBP49356 437 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 SIM2Q14190 667 aaPredicted RBP17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 PON2Q15165 354 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 SF3A1Q15459 793 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 CEP68Q76N32 757 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 DYMQ7RTS9 669 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 CELF5Q8N6W0 485 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 BPIFB1Q8TDL5 484 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 NOC3LQ8WTT2 800 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 KCNN1Q92952 543 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 ZCWPW1Q9H0M4 648 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 SMG9Q9H0W8 520 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 ASB7Q9H672 318 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 THG1LQ9NWX6 298 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 DPP3Q9NY33 737 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 C2CD2Q9Y426 696 aa17.09■□□□□ 0.33
CHMP4A-204ENST00000530996 PIRO00625 290 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 CYP11A1P05108 521 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 ADRB2P07550 413 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 MCM2P49736 904 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 GTF2BQ00403 316 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 PLCB2Q00722 1185 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 TSPY1Q01534 308 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 TNK2Q07912 1038 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 SV2CQ496J9 727 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 WSCD1Q658N2 575 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 TXNDC11Q6PKC3 985 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 RALGPS2Q86X27 583 aaPredicted RBP17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 TTC16Q8NEE8 873 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 MKNK1Q9BUB5 465 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 TASP1Q9H6P5 420 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 PARD6AQ9NPB6 346 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 OBP2AQ9NY56 170 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 HSFX1Q9UBD0 423 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 MYH11P35749 1972 aa17.08■□□□□ 0.32
CHMP4A-204ENST00000530996 CEP250Q9BV73 2442 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 ANO9A1A5B4 782 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 MYBPHLA2RUH7 354 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 KCNA4P22459 653 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 AVPR1AP37288 418 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms