RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 MTMR11A4FU01 709 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 GPR37L1O60883 481 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 CST3P01034 146 aaPredicted RBP16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 PTPN2P17706 415 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 NR2F2P24468 414 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 CASP4P49662 377 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 CLDN10P78369 228 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 ZXDAP98168 799 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 DUSP4Q13115 394 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 TMEM31Q5JXX7 168 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 ZNF658Q5TYW1 1059 aaPredicted RBP16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 CEP135Q66GS9 1140 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 CENPPQ6IPU0 288 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 TMEM86AQ8N2M4 240 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 SPATA18Q8TC71 538 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 PLEKHO2Q8TD55 490 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 ZNF516Q92618 1163 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 ERCC4Q92889 916 aaPredicted RBP16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 MYADMQ96S97 322 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 EPS15L1Q9UBC2 864 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 HSFX1Q9UBD0 423 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 L1RE1Q9UN81 338 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 SORCS3Q9UPU3 1222 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 FRMD4BQ9Y2L6 1034 aa16.06■□□□□ 0.16
PPFIA1-216ENST00000530746 LRRIQ3A6PVS8 624 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 MAPK13O15264 365 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 ASGR2P07307 311 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 LAMP2P13473 410 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 RPL13P26373 211 aaKnown RBP16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 AP3M2P53677 418 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 TWF1Q12792 350 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 SMARCB1Q12824 385 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 SOWAHAQ2M3V2 549 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 SLC39A12Q504Y0 691 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 ZCWPW2Q504Y3 356 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 COBLL1Q53SF7 1204 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 DPH6Q7L8W6 267 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 ELMOD1Q8N336 334 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 GTPBP4Q9BZE4 634 aaKnown RBP16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 CRISPLD1Q9H336 500 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 YIPF1Q9Y548 306 aa16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 ZFP37Q9Y6Q3 630 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-216ENST00000530746 FAM86C2PA6NEL3 165 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 RHOP08100 348 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 PRCPP42785 496 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 LHX1P48742 406 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 UBE2HP62256 183 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 PLD1Q13393 1074 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 TRPC3Q13507 836 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 MTMR3Q13615 1198 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 EDRF1Q3B7T1 1238 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 IQCEQ6IPM2 695 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 LIMS2Q7Z4I7 341 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 LRRTM3Q86VH5 581 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 DCP1BQ8IZD4 617 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 ADGRF2Q8IZF7 708 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 ATAD1Q8NBU5 361 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 TMC2Q8TDI7 906 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 C2orf15Q8WU43 125 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 ZNF512Q96ME7 567 aaPredicted RBP16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 ACBD6Q9BR61 282 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 CORO1BQ9BR76 489 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 LRFN3Q9BTN0 628 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 KCNK12Q9HB15 430 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 AVENQ9NQS1 362 aaPredicted RBP16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 DDX43Q9NXZ2 648 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 CEP72Q9P209 647 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 IGSF9Q9P2J2 1179 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 CDH7Q9ULB5 785 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 SLC27A5Q9Y2P5 690 aa16.04■□□□□ 0.16
PPFIA1-216ENST00000530746 PRR33A8MZF0 331 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 GABRDO14764 452 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 IKBKBO14920 756 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 PHACTR2O75167 634 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 AKAP3O75969 853 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 STAU1O95793 577 aaKnown RBP16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 C4BPAP04003 597 aaKnown RBP16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 DLG4P78352 724 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 MYL7Q01449 175 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 TSPY1Q01534 308 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 ADAM9Q13443 819 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 TDRD10Q5VZ19 366 aaKnown RBP16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 TRIM67Q6ZTA4 783 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 OSTM1Q86WC4 334 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 UBALD2Q8IYN6 164 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 TTC9BQ8N6N2 239 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 ITFG1Q8TB96 612 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 FGF13Q92913 245 aa16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 MRPS23Q9Y3D9 190 aaKnown RBP16.03■□□□□ 0.16
PPFIA1-216ENST00000530746 ACAT1P24752 427 aaKnown RBP16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 PCSK1P29120 753 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 ATICP31939 592 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 PSMC2P35998 433 aaKnown RBP16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 ALDH1A3P47895 512 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 TUFMP49411 452 aaKnown RBP16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 VAMP7P51809 220 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 EPHB3P54753 998 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 MYL6P60660 151 aa16.02■□□□□ 0.16
PPFIA1-216ENST00000530746 SIGLEC14Q08ET2 396 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms