RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 FAM200AQ8TCP9 573 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 IMPG2Q9BZV3 1241 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 NDST4Q9H3R1 872 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 LIMA1Q9UHB6 759 aaKnown RBP22.86■■□□□ 1.25
CAPN1-220ENST00000530567 STXBP5LQ9Y2K9 1186 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 NME7Q9Y5B8 376 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 CDY1Q9Y6F8 540 aa22.86■■□□□ 1.25
CAPN1-220ENST00000530567 SCARA5Q6ZMJ2 495 aa22.85■■□□□ 1.25
CAPN1-220ENST00000530567 GLYCTKQ8IVS8 523 aa22.85■■□□□ 1.25
CAPN1-220ENST00000530567 SPATA18Q8TC71 538 aa22.85■■□□□ 1.25
CAPN1-220ENST00000530567 SLC22A17Q8WUG5 538 aa22.85■■□□□ 1.25
CAPN1-220ENST00000530567 PPP2R3CQ969Q6 453 aa22.85■■□□□ 1.25
CAPN1-220ENST00000530567 MMS19Q96T76 1030 aa22.85■■□□□ 1.25
CAPN1-220ENST00000530567 CDCA3Q99618 268 aaPredicted RBP22.85■■□□□ 1.25
CAPN1-220ENST00000530567 MRPL45Q9BRJ2 306 aaKnown RBP22.85■■□□□ 1.25
CAPN1-220ENST00000530567 BCO2Q9BYV7 579 aa22.85■■□□□ 1.25
CAPN1-220ENST00000530567 NIF3L1Q9GZT8 377 aa22.85■■□□□ 1.25
CAPN1-220ENST00000530567 BECN2A8MW95 431 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 HCRTO43612 131 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 TACC1O75410 805 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 GLP2RO95838 553 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 ADH1AP07327 375 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 WARSP23381 471 aaKnown RBP22.84■■□□□ 1.25
CAPN1-220ENST00000530567 OR1D2P34982 312 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 RAP1GAPP47736 663 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 RBM10P98175 930 aaKnown RBP22.84■■□□□ 1.25
CAPN1-220ENST00000530567 METTL23Q86XA0 190 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 TATDN2Q93075 761 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 TMEM209Q96SK2 561 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 BRWD1Q9NSI6 2320 aa22.84■■□□□ 1.25
CAPN1-220ENST00000530567 GTPBP10A4D1E9 387 aaKnown RBP22.83■■□□□ 1.25
CAPN1-220ENST00000530567 LRRC10BA6NIK2 292 aa22.83■■□□□ 1.25
CAPN1-220ENST00000530567 LINC01565O15544 149 aa22.83■■□□□ 1.25
CAPN1-220ENST00000530567 KLRC2P26717 231 aa22.83■■□□□ 1.25
CAPN1-220ENST00000530567 CLCN4P51793 760 aa22.83■■□□□ 1.25
CAPN1-220ENST00000530567 COPB1P53618 953 aaKnown RBP22.83■■□□□ 1.25
CAPN1-220ENST00000530567 CDH8P55286 799 aa22.83■■□□□ 1.25
CAPN1-220ENST00000530567 ROR1Q01973 937 aa22.83■■□□□ 1.25
CAPN1-220ENST00000530567 RAB33AQ14088 237 aa22.83■■□□□ 1.25
CAPN1-220ENST00000530567 CCDC85BQ15834 202 aaPredicted RBP22.83■■□□□ 1.25
CAPN1-220ENST00000530567 EFHBQ8N7U6 833 aa22.83■■□□□ 1.25
CAPN1-220ENST00000530567 GCNT4Q9P109 453 aa22.83■■□□□ 1.25
CAPN1-220ENST00000530567 HCFC2Q9Y5Z7 792 aa22.83■■□□□ 1.25
CAPN1-220ENST00000530567 OR6C75A6NL08 312 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 CLSTN1O94985 981 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 FAM163BP0C2L3 166 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 OR4Q2P0C623 313 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 P4HA1P13674 534 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 CETN1Q12798 172 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 CTC1Q2NKJ3 1217 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 LILRA6Q6PI73 481 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 CCDC150Q8NCX0 1101 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 EHBP1Q8NDI1 1231 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 FAXDC2Q96IV6 333 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 ARID3AQ99856 593 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 CRACR2AQ9BSW2 395 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 OXCT2Q9BYC2 517 aaPredicted RBP22.82■■□□□ 1.24
CAPN1-220ENST00000530567 INTS2Q9H0H0 1204 aaKnown RBP22.82■■□□□ 1.24
CAPN1-220ENST00000530567 VPS16Q9H269 839 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 IGFLR1Q9H665 355 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 DDX43Q9NXZ2 648 aaKnown RBP22.82■■□□□ 1.24
CAPN1-220ENST00000530567 WDR27A2RRH5 827 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 EPCAMP16422 314 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 LMO2P25791 158 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 LHX1P48742 406 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 WDR44Q5JSH3 913 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 PALB2Q86YC2 1186 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 MAFAQ8NHW3 353 aaPredicted RBP22.82■■□□□ 1.24
CAPN1-220ENST00000530567 ZCWPW1Q9H0M4 648 aa22.82■■□□□ 1.24
CAPN1-220ENST00000530567 TGM5O43548 720 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 WEE2P0C1S8 567 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 ACAT1P24752 427 aaKnown RBP22.81■■□□□ 1.24
CAPN1-220ENST00000530567 LRMPQ12912 555 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 ADAM15Q13444 863 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 TRIM65Q6PJ69 517 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 GBP6Q6ZN66 633 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 PPFIBP1Q86W92 1011 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 THEM5Q8N1Q8 247 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 PPM1EQ8WY54 764 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 PKMYT1Q99640 499 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 CYP3A43Q9HB55 503 aa22.81■■□□□ 1.24
CAPN1-220ENST00000530567 PRUNE2Q8WUY3 3088 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 LGALS16A8MUM7 142 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 ABLIM3O94929 683 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 VNN2O95498 520 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 GLUD1P00367 558 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 C1RP00736 705 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 SLC9A1P19634 815 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 CDK11BP21127 795 aaKnown RBP22.8■■□□□ 1.24
CAPN1-220ENST00000530567 PON1P27169 355 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 ARPP19P56211 112 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 INCA1Q0VD86 236 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 CUL2Q13617 745 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 EXOC3L4Q17RC7 722 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 CCDC142Q17RM4 750 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 DPY19L2P1Q6NXN4 242 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 LLGL2Q6P1M3 1020 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 TMEM184AQ6ZMB5 413 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 LRRTM3Q86VH5 581 aa22.8■■□□□ 1.24
CAPN1-220ENST00000530567 ARHGEF19Q8IW93 802 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms