RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 FAM20AQ96MK3 541 aa9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 SPATA33Q96N06 139 aa9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 USP28Q96RU2 1077 aa9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 PCYT2Q99447 389 aa9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 AP5M1Q9H0R1 490 aa9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 ADAM7Q9H2U9 754 aa9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 UNC45AQ9H3U1 944 aa9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 TBC1D22BQ9NU19 505 aa9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 SUCOQ9UBS9 1254 aaKnown RBP9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 SLC9A2Q9UBY0 812 aa9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 CNOT11Q9UKZ1 510 aaKnown RBP9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 ELP1O95163 1332 aa9.82□□□□□ -0.84
CCDC90B-217ENST00000530253 IGKV6D-21A0A0A0MT36 114 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 DDX39AO00148 427 aaKnown RBP9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 F2P00734 622 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 CYBBP04839 570 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 ASGR1P07306 291 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 OR52Z1P0C646 297 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 CAPN2P17655 700 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 CPT1AP50416 773 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 ACLYP53396 1101 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 NCKAP1LP55160 1127 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 ACTR2P61160 394 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 ZNF200P98182 395 aaPredicted RBP9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 PURAQ00577 322 aaKnown RBP9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 NFKB2Q00653 900 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 SP4Q02446 784 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 PLP2Q04941 152 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 PPP2R5CQ13362 524 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 PTPAQ15257 358 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 IL17AQ16552 155 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 LRCH2Q5VUJ6 765 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 ABHD15Q6UXT9 468 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 RNF180Q86T96 592 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 C7orf61Q8IZ16 206 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 ARRDC4Q8NCT1 418 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 KAT2BQ92831 832 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 SDF4Q9BRK5 362 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 C16orf70Q9BSU1 422 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 TEKT3Q9BXF9 490 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 MLXIPQ9HAP2 919 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 SPC25Q9HBM1 224 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 UBP1Q9NZI7 540 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 MORC2Q9Y6X9 1032 aaPredicted RBP9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 GRIN2DO15399 1336 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 EMSYQ7Z589 1322 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 IGSF9BQ9UPX0 1349 aa9.81□□□□□ -0.84
CCDC90B-217ENST00000530253 HAS3O00219 553 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 GAS7O60861 476 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 PPFIA4O75335 1185 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 LGALS2P05162 132 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 SUPT20HL2P0C7V6 817 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 TCF7P36402 384 aaPredicted RBP9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 PRPHP41219 470 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 NASPP49321 788 aaPredicted RBP9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 EFEMP1Q12805 493 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 SF3A1Q15459 793 aaKnown RBP9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 CXCL17Q6UXB2 119 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 CCDC60Q8IWA6 550 aaPredicted RBP9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 TP53I13Q8NBR0 393 aaPredicted RBP9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 SEPT1Q8WYJ6 367 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 NKD1Q969G9 470 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 CHAMP1Q96JM3 812 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 IPO9Q96P70 1041 aaKnown RBP9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 CLIC4Q9Y696 253 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 SCN10AQ9Y5Y9 1956 aa9.8□□□□□ -0.84
CCDC90B-217ENST00000530253 KBTBD13C9JR72 458 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 LAD1O00515 517 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 NOP56O00567 594 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 FFAR3O14843 346 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 MYL3P08590 195 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 GSTM1P09488 218 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 ZNF286BP0CG31 522 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 NOP2P46087 812 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 JAK3P52333 1124 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 CORO7P57737 925 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 UGCGQ16739 394 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 DGKDQ16760 1214 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 RTP2Q5QGT7 225 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 SLITRK4Q8IW52 837 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 SMAP1Q8IYB5 467 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 SLC43A3Q8NBI5 491 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 PCSK9Q8NBP7 692 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 TMEM52Q8NDY8 209 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 RDM1Q8NG50 284 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 AFAP1L1Q8TED9 768 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 MTG1Q9BT17 334 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 BDH2Q9BUT1 245 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 NT5C1AQ9BXI3 368 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 RNF38Q9H0F5 515 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 TTC12Q9H892 705 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 ADAMTS1Q9UHI8 967 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 LAMA3Q16787 3333 aa9.79□□□□□ -0.84
CCDC90B-217ENST00000530253 CHMP2AO43633 222 aa9.78□□□□□ -0.84
CCDC90B-217ENST00000530253 KPNA6O60684 536 aa9.78□□□□□ -0.84
CCDC90B-217ENST00000530253 CABYRO75952 493 aa9.78□□□□□ -0.84
CCDC90B-217ENST00000530253 BAG4O95429 457 aaKnown RBP9.78□□□□□ -0.84
CCDC90B-217ENST00000530253 BMP15O95972 392 aa9.78□□□□□ -0.84
CCDC90B-217ENST00000530253 MSL3P1P0C860 447 aa9.78□□□□□ -0.84
CCDC90B-217ENST00000530253 IMPDH2P12268 514 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms