RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 C2orf40Q9H1Z8 148 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 CDT1Q9H211 546 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 C8orf33Q9H7E9 229 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TTC12Q9H892 705 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TRPV4Q9HBA0 871 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TRPV5Q9NQA5 729 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TUBGCP4Q9UGJ1 667 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 AFF4Q9UHB7 1163 aaKnown RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 PCDHA12Q9UN75 941 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 SLC8A2Q9UPR5 921 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 SLC27A5Q9Y2P5 690 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 MAST4O15021 2626 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 ARHGEF35A5YM69 484 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 PATE3B3GLJ2 98 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 H7C4K7 107 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 MEFVO15553 781 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 HYAL3O43820 417 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 NEMFO60524 1076 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 RNF40O75150 1001 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 MICAL2O94851 1124 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 EGFP01133 1207 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 SPATA31C1P0DKV0 1188 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 GBP1P32455 592 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 GUCY2FP51841 1108 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 YARSP54577 528 aaKnown RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 FCHO2Q0JRZ9 810 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 SCRN1Q12765 414 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 DUSP4Q13115 394 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 PLK5Q496M5 336 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 GPR158Q5T848 1215 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 FSTL4Q6MZW2 842 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 PADI6Q6TGC4 694 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 RTL10Q7L3V2 364 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 RALGPS2Q86X27 583 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 CATSPER3Q86XQ3 398 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 KDF1Q8NAX2 398 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 STKLD1Q8NE28 680 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 MCPH1Q8NEM0 835 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 DEFB124Q8NES8 71 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 DDX12PQ92771 950 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 KCNB2Q92953 911 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TBC1D32Q96NH3 1257 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TMEM209Q96SK2 561 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 LPIN3Q9BQK8 851 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 MKNK1Q9BUB5 465 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 POLR3CQ9BUI4 534 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 CCDC94Q9BW85 323 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 LRRC3Q9BY71 257 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TPSD1Q9BZJ3 242 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TMEM60Q9H2L4 133 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 ATXN3LQ9H3M9 355 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 FBRSL1Q9HCM7 1045 aaKnown RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 VPS45Q9NRW7 570 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 GREB1Q4ZG55 1949 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 SPAG17Q6Q759 2223 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 LNP1A1A4G5 178 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 FAM187AA6NFU0 413 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 OTOL1A6NHN0 477 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-213ENST00000529828 SYN3O14994 580 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 CAVIN2O95810 425 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 ARSAP15289 507 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 PSMA5P28066 241 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 GABRR2P28476 465 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 KRT2P35908 639 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 GRM5P41594 1212 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 NAMPTP43490 491 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 EPHA5P54756 1037 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 EVCP57679 992 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 PLD1Q13393 1074 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 MRPL58Q14197 206 aaKnown RBP3.85□□□□□ -1.79
PTPRC-213ENST00000529828 TPGS2Q68CL5 300 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 CPLX2Q6PUV4 134 aaKnown RBP3.85□□□□□ -1.79
PTPRC-213ENST00000529828 C19orf48Q6RUI8 117 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 GAREM2Q75VX8 874 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 RUFY3Q7L099 469 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 HAUS6Q7Z4H7 955 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 TTC30AQ86WT1 665 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 ATAD1Q8NBU5 361 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 GATA6Q92908 595 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 CHFRQ96EP1 664 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 MSANTD3Q96H12 275 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 LOXL4Q96JB6 756 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 ZBTB45Q96K62 511 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-213ENST00000529828 SEPT5Q99719 369 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-213ENST00000529828 NAP1L4Q99733 375 aaKnown RBP3.85□□□□□ -1.79
PTPRC-213ENST00000529828 DUSP15Q9H1R2 295 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-213ENST00000529828 EBF3Q9H4W6 596 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 ANKFY1Q9P2R3 1169 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 KLK13Q9UKR3 277 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 WASF3Q9UPY6 502 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 CCL26Q9Y258 94 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 ATG2BQ96BY7 2078 aa3.85□□□□□ -1.79
PTPRC-213ENST00000529828 ATXN2Q99700 1313 aaKnown RBP3.85□□□□□ -1.79
PTPRC-213ENST00000529828 PDCD11Q14690 1871 aaKnown RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 SPAARA0A1B0GVQ0 90 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 MTMR11A4FU01 709 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ANTXRLA6NF34 631 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 CCDC169A6NNP5 214 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 PPEF2O14830 753 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 BCKDHBP21953 392 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms