RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 STK33Q9BYT3 514 aa14.59□□□□□ -0.07
SMCO4-205ENST00000529714 DNAI2Q9GZS0 605 aa14.59□□□□□ -0.07
SMCO4-205ENST00000529714 SDCBP2Q9H190 292 aa14.59□□□□□ -0.07
SMCO4-205ENST00000529714 CISHQ9NSE2 258 aa14.59□□□□□ -0.07
SMCO4-205ENST00000529714 BARX2Q9UMQ3 279 aaPredicted RBP14.59□□□□□ -0.07
SMCO4-205ENST00000529714 CNTN6Q9UQ52 1028 aa14.59□□□□□ -0.07
SMCO4-205ENST00000529714 SSX2IPQ9Y2D8 614 aa14.59□□□□□ -0.07
SMCO4-205ENST00000529714 FHOD1Q9Y613 1164 aa14.59□□□□□ -0.07
SMCO4-205ENST00000529714 H7C4K7 107 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 URODP06132 367 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 WEE2P0C1S8 567 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 ACO1P21399 889 aaKnown RBP14.58□□□□□ -0.08
SMCO4-205ENST00000529714 GLUD2P49448 558 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 POLR2FP61218 127 aaKnown RBP14.58□□□□□ -0.08
SMCO4-205ENST00000529714 MRPL58Q14197 206 aaKnown RBP14.58□□□□□ -0.08
SMCO4-205ENST00000529714 BMS1Q14692 1282 aaKnown RBP14.58□□□□□ -0.08
SMCO4-205ENST00000529714 PTPN21Q16825 1174 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 RTP2Q5QGT7 225 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 VARS2Q5ST30 1063 aaKnown RBP14.58□□□□□ -0.08
SMCO4-205ENST00000529714 OVOS1Q6IE37 1185 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 GJB7Q6PEY0 223 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 ANKS3Q6ZW76 656 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 CACNA2D4Q7Z3S7 1137 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 SPRED2Q7Z698 418 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 FMNL3Q8IVF7 1028 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 VPS52Q8N1B4 723 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 SPPL3Q8TCT6 385 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 KAT5Q92993 513 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 MRPL45Q9BRJ2 306 aaKnown RBP14.58□□□□□ -0.08
SMCO4-205ENST00000529714 LMAN2LQ9H0V9 348 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 ZBP1Q9H171 429 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 SNX25Q9H3E2 840 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 MTUS1Q9ULD2 1270 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 CHD7Q9P2D1 2997 aa14.58□□□□□ -0.08
SMCO4-205ENST00000529714 F8VZ95 297 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 CILPO75339 1184 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 CTSAP10619 480 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 PCSK1P29120 753 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 GNL1P36915 607 aaPredicted RBP14.57□□□□□ -0.08
SMCO4-205ENST00000529714 RAP1GAPP47736 663 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 CDH8P55286 799 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 JAM2P57087 298 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 CREMQ03060 361 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 GPM6BQ13491 265 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 DRAP1Q14919 205 aaPredicted RBP14.57□□□□□ -0.08
SMCO4-205ENST00000529714 KIAA0319Q5VV43 1072 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 PDE12Q6L8Q7 609 aaKnown RBP14.57□□□□□ -0.08
SMCO4-205ENST00000529714 ZNF280DQ6N043 979 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 KIAA1841Q6NSI8 718 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 TAS1R1Q7RTX1 841 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 THEM5Q8N1Q8 247 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 POF1BQ8WVV4 589 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 SPAG5Q96R06 1193 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 ACBD6Q9BR61 282 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 NUCKS1Q9H1E3 243 aaKnown RBP14.57□□□□□ -0.08
SMCO4-205ENST00000529714 ALG13Q9NP73 1137 aaKnown RBP14.57□□□□□ -0.08
SMCO4-205ENST00000529714 NLRC4Q9NPP4 1024 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMCO4-205ENST00000529714 AJAP1Q9UKB5 411 aaPredicted RBP14.57□□□□□ -0.08
SMCO4-205ENST00000529714 CAPN11Q9UMQ6 739 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 STXBP5LQ9Y2K9 1186 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 TIMM13Q9Y5L4 95 aaPredicted RBP14.57□□□□□ -0.08
SMCO4-205ENST00000529714 BACE2Q9Y5Z0 518 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 IRAK3Q9Y616 596 aa14.57□□□□□ -0.08
SMCO4-205ENST00000529714 OR6C75A6NL08 312 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 TBC1D4O60343 1298 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 GYPCP04921 128 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 TPM1P09493 284 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 CD58P19256 250 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 ZNF132P52740 706 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 TBX2Q13207 712 aaPredicted RBP14.56□□□□□ -0.08
SMCO4-205ENST00000529714 RAPGEF1Q13905 1077 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 ARHGAP44Q17R89 818 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 TMC6Q7Z403 805 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 PPFIBP1Q86W92 1011 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 OSTM1Q86WC4 334 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 CEP57Q86XR8 500 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 FAM71AQ8IYT1 594 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 ZNF397Q8NF99 534 aaPredicted RBP14.56□□□□□ -0.08
SMCO4-205ENST00000529714 OR6B3Q8NGW1 331 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 LNX1Q8TBB1 728 aaPredicted RBP14.56□□□□□ -0.08
SMCO4-205ENST00000529714 ARNTL2Q8WYA1 636 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 RIN2Q8WYP3 895 aaPredicted RBP14.56□□□□□ -0.08
SMCO4-205ENST00000529714 BAP1Q92560 729 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 ANP32BQ92688 251 aaKnown RBP14.56□□□□□ -0.08
SMCO4-205ENST00000529714 TNIP3Q96KP6 325 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 NT5C1AQ9BXI3 368 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 GPR88Q9GZN0 384 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 NGRNQ9NPE2 291 aaKnown RBP14.56□□□□□ -0.08
SMCO4-205ENST00000529714 TLR9Q9NR96 1032 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 MRPL17Q9NRX2 175 aaKnown RBP14.56□□□□□ -0.08
SMCO4-205ENST00000529714 DDX43Q9NXZ2 648 aaKnown RBP14.56□□□□□ -0.08
SMCO4-205ENST00000529714 IMPACTQ9P2X3 320 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 MTRRQ9UBK8 725 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 CDH9Q9ULB4 789 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 PCDHB4Q9Y5E5 795 aa14.56□□□□□ -0.08
SMCO4-205ENST00000529714 COL4A4P53420 1690 aaPredicted RBP14.55□□□□□ -0.08
SMCO4-205ENST00000529714 TRIOBPQ9H2D6 2365 aa14.55□□□□□ -0.08
SMCO4-205ENST00000529714 A8MXQ7 604 aa14.55□□□□□ -0.08
SMCO4-205ENST00000529714 FOXN3O00409 490 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms