RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 RAP1GAPP47736 663 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 PEX3P56589 373 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 AMPD2Q01433 879 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 GRSF1Q12849 480 aaKnown RBP eCLIP9.8□□□□□ -0.84
VPS11-203ENST00000529545 DUSP4Q13115 394 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 TAF12Q16514 161 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 GPR158Q5T848 1215 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 MPZL3Q6UWV2 235 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 KBTBD6Q86V97 674 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 BEST2Q8NFU1 509 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 BPIFB1Q8TDL5 484 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 EXOC4Q96A65 974 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 ZFYVE19Q96K21 471 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 PGLYRP2Q96PD5 576 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 GCNAQ96QF7 691 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 TMEM209Q96SK2 561 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 TARS2Q9BW92 718 aaKnown RBP9.8□□□□□ -0.84
VPS11-203ENST00000529545 PTPRHQ9HD43 1115 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 KMT5AQ9NQR1 393 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 RALYQ9UKM9 306 aaKnown RBP9.8□□□□□ -0.84
VPS11-203ENST00000529545 SPAG17Q6Q759 2223 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 NCANO14594 1321 aa9.8□□□□□ -0.84
VPS11-203ENST00000529545 NUP210Q8TEM1 1887 aaPredicted RBP9.79□□□□□ -0.84
VPS11-203ENST00000529545 WNT7AO00755 349 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 EXTL3O43909 919 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 FDPSP14324 419 aaKnown RBP9.79□□□□□ -0.84
VPS11-203ENST00000529545 GABRR2P28476 465 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 NPTX2P47972 431 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 PXNP49023 591 aaPredicted RBP9.79□□□□□ -0.84
VPS11-203ENST00000529545 NOVA1P51513 510 aaKnown RBP9.79□□□□□ -0.84
VPS11-203ENST00000529545 STRN3Q13033 797 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 GPR17Q13304 367 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 ORC2Q13416 577 aaPredicted RBP9.79□□□□□ -0.84
VPS11-203ENST00000529545 VEPH1Q14D04 833 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 ELF2Q15723 593 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 STXBP5Q5T5C0 1151 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 DAB2IPQ5VWQ8 1189 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 PSAPL1Q6NUJ1 521 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 ARMCX5Q6P1M9 558 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 UNQ6494/PRO21346Q6UXR6 183 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 DSTYKQ6XUX3 929 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 DNAJB7Q7Z6W7 309 aaPredicted RBP9.79□□□□□ -0.84
VPS11-203ENST00000529545 TMC8Q8IU68 726 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 CAMKK1Q8N5S9 505 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 TATDN2Q93075 761 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 ZC3H10Q96K80 434 aaKnown RBP9.79□□□□□ -0.84
VPS11-203ENST00000529545 DRC1Q96MC2 740 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 LRRC3Q9BY71 257 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 TASP1Q9H6P5 420 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 RXFP3Q9NSD7 469 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 C2orf42Q9NWW7 574 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 KCNG1Q9UIX4 513 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 ZMYM5Q9UJ78 669 aa9.79□□□□□ -0.84
VPS11-203ENST00000529545 TSR3Q9UJK0 312 aaKnown RBP9.79□□□□□ -0.84
VPS11-203ENST00000529545 TIMM13Q9Y5L4 95 aaPredicted RBP9.79□□□□□ -0.84
VPS11-203ENST00000529545 M0QZQ0 153 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
VPS11-203ENST00000529545 RHOBTB1O94844 696 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 OR4Q2P0C623 313 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 WEE1P30291 646 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 CDC25CP30307 473 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 MATR3P43243 847 aaKnown RBP eCLIP9.78□□□□□ -0.84
VPS11-203ENST00000529545 MCM2P49736 904 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 TNK2Q07912 1038 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 COL9A2Q14055 689 aaPredicted RBP9.78□□□□□ -0.84
VPS11-203ENST00000529545 MYBPC2Q14324 1141 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 KARSQ15046 597 aaKnown RBP9.78□□□□□ -0.84
VPS11-203ENST00000529545 ZNF174Q15697 407 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 WDR44Q5JSH3 913 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 PLA2G2CQ5R387 149 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 OVOS1Q6IE37 1185 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 CENPPQ6IPU0 288 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 GAREM2Q75VX8 874 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 NECAB1Q8N987 351 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 TTC13Q8NBP0 860 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 PSMG2Q969U7 264 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 LRRC3BQ96PB8 259 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 EDEM2Q9BV94 578 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 RAB34Q9BZG1 259 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 DNAJC25Q9H1X3 360 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 C17orf75Q9HAS0 396 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 PLEKHA5Q9HAU0 1116 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 NPDC1Q9NQX5 325 aaPredicted RBP9.78□□□□□ -0.84
VPS11-203ENST00000529545 ARHGAP28Q9P2N2 729 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 ANKFY1Q9P2R3 1169 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 LRWD1Q9UFC0 647 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 TUBGCP4Q9UGJ1 667 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 UBQLN1Q9UMX0 589 aaKnown RBP9.78□□□□□ -0.84
VPS11-203ENST00000529545 KIAA1024Q9UPX6 916 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 DNM3Q9UQ16 869 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 SLC27A5Q9Y2P5 690 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 FAM208BQ5VWN6 2430 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 KIF26AQ9ULI4 1882 aaPredicted RBP9.78□□□□□ -0.84
VPS11-203ENST00000529545 SDK1Q7Z5N4 2213 aa9.78□□□□□ -0.84
VPS11-203ENST00000529545 TMEM8BA6NDV4 472 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 CLDN3O15551 220 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 HIP1RO75146 1068 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 TOM1L1O75674 476 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 TYMPP19971 482 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 PROZP22891 400 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms