RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 BRD9Q9H8M2 597 aa3.9□□□□□ -1.79
BRCA2-203ENST00000528762 SLAMF7Q9NQ25 335 aa3.9□□□□□ -1.79
BRCA2-203ENST00000528762 SERHLQ9NQF3 203 aa3.9□□□□□ -1.79
BRCA2-203ENST00000528762 STK32BQ9NY57 414 aa3.9□□□□□ -1.79
BRCA2-203ENST00000528762 TERF2IPQ9NYB0 399 aa3.9□□□□□ -1.79
BRCA2-203ENST00000528762 COL20A1Q9P218 1284 aa3.9□□□□□ -1.79
BRCA2-203ENST00000528762 AFF4Q9UHB7 1163 aaKnown RBP3.9□□□□□ -1.79
BRCA2-203ENST00000528762 ANAPC4Q9UJX5 808 aa3.9□□□□□ -1.79
BRCA2-203ENST00000528762 RUVBL1Q9Y265 456 aaKnown RBP3.9□□□□□ -1.79
BRCA2-203ENST00000528762 PCDHGB2Q9Y5G2 931 aa3.9□□□□□ -1.79
BRCA2-203ENST00000528762 ZMYM3Q14202 1370 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 ATRNL1Q5VV63 1379 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 TCRBV7S2A1N4TA0A589 114 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 FFAR2O15552 330 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 PLA2G6O60733 806 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 SLC43A1O75387 559 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 CD1AP06126 327 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 SBK3P0C264 359 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 HARSP12081 509 aaKnown RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 ALOX15P16050 662 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 HIBADHP31937 336 aaKnown RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 PHKA1P46020 1223 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 HSPA7P48741 367 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 GZMKP49863 264 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 NPEPPSP55786 919 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 TGFB2P61812 414 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 MXRA7P84157 204 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 EXOSC9Q06265 439 aaKnown RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 CTBP1Q13363 440 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 MRPL49Q13405 166 aaKnown RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 PMS2P11Q13670 270 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 SIM2Q14190 667 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 STARD3Q14849 445 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 PUM3Q15397 648 aaKnown RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 SLC44A4Q53GD3 710 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 ALFQ53S48 1182 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 CCDC93Q567U6 631 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 MFSD14BQ5SR56 506 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 KLHDC7AQ5VTJ3 777 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 FNDC7Q5VTL7 733 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 AFMIDQ63HM1 303 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 SPTY2D1Q68D10 685 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 MAMDC4Q6UXC1 1216 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 BEND5Q7L4P6 421 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 SGMS1Q86VZ5 419 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 TICAM2Q86XR7 235 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 SDR16C5Q8N3Y7 309 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 MYCT1Q8N699 235 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 AOPEPQ8N6M6 819 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 CELF5Q8N6W0 485 aaKnown RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 DCBLD1Q8N8Z6 715 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 NLGN4YQ8NFZ3 816 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 MAML1Q92585 1016 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 FAM89AQ96GI7 184 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 MYOCQ99972 504 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 GDF15Q99988 308 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 MRI1Q9BV20 369 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 MMRN2Q9H8L6 949 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 AGO3Q9H9G7 860 aaKnown RBP3.89□□□□□ -1.79
BRCA2-203ENST00000528762 PLA2G3Q9NZ20 509 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 CFAP97Q9P2B7 532 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 C11orf21Q9P2W6 132 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 GTF2A1LQ9UNN4 478 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 MED16Q9Y2X0 877 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 SLC30A1Q9Y6M5 507 aa3.89□□□□□ -1.79
BRCA2-203ENST00000528762 PRSS29PA6NIE9 313 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 CAPN14A8MX76 684 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 HNRNPDLO14979 420 aaKnown RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 AREL1O15033 823 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 KIAA0391O15091 583 aaKnown RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 THAP12O43422 761 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 MATN4O95460 622 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 GJB1P08034 283 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 FAM163BP0C2L3 166 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 ATP5JP18859 108 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 TGM1P22735 817 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 ACRV1P26436 265 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 EEF1GP26641 437 aaKnown RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 PDIA3P30101 505 aaKnown RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 ALDH1A3P47895 512 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 RPS16P62249 146 aaKnown RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 GALNT1Q10472 559 aaPredicted RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 SLC13A2Q13183 592 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 NFYCQ13952 458 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 KIF22Q14807 665 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 GRM7Q14831 915 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 MAPRE1Q15691 268 aaKnown RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 MPEG1Q2M385 716 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 SLC35G1Q2M3R5 365 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 AMOTQ4VCS5 1084 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 SEM1Q6ZVN7 128 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 RNF44Q7L0R7 432 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 D2HGDHQ8N465 521 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 PCSK9Q8NBP7 692 aaKnown RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 IL17REQ8NFR9 667 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 CACTINQ8WUQ7 758 aaKnown RBP3.88□□□□□ -1.79
BRCA2-203ENST00000528762 RABGGTAQ92696 567 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 CEP95Q96GE4 821 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 SNX22Q96L94 193 aa3.88□□□□□ -1.79
BRCA2-203ENST00000528762 PAGR1Q9BTK6 254 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms