RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 BFSP1Q12934 665 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 MGAT5BQ3V5L5 792 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 STXBP5Q5T5C0 1151 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 CENPPQ6IPU0 288 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 CC2D1AQ6P1N0 951 aaPredicted RBP12.54□□□□□ -0.4
CMTM1-211ENST00000528484 TXNDC11Q6PKC3 985 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 C1orf186Q6ZWK4 172 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 METTL23Q86XA0 190 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 GPIHBP1Q8IV16 184 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 KCTD17Q8N5Z5 321 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 FBXO18Q8NFZ0 1043 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 RSPRY1Q96DX4 576 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 ZFYVE19Q96K21 471 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 DNAJC25Q9H1X3 360 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 KCND2Q9NZV8 630 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 DSEQ9UL01 958 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 PCDHGA5Q9Y5G8 931 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 NCANO14594 1321 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 SDK1Q7Z5N4 2213 aa12.54□□□□□ -0.4
CMTM1-211ENST00000528484 TTC26A0AVF1 554 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 SFI1A8K8P3 1242 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 HNRNPDLO14979 420 aaKnown RBP12.53□□□□□ -0.4
CMTM1-211ENST00000528484 EPN2O95208 641 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
CMTM1-211ENST00000528484 DDX6P26196 483 aaKnown RBP eCLIP12.53□□□□□ -0.4
CMTM1-211ENST00000528484 WEE1P30291 646 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 AARSP49588 968 aaKnown RBP eCLIP12.53□□□□□ -0.4
CMTM1-211ENST00000528484 RAD51AP2Q09MP3 1159 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 SMARCB1Q12824 385 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
CMTM1-211ENST00000528484 SF3A2Q15428 464 aaKnown RBP12.53□□□□□ -0.4
CMTM1-211ENST00000528484 ELF2Q15723 593 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 STPG1Q5TH74 334 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 GAREM2Q75VX8 874 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 CCDC83Q8IWF9 413 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 CD302Q8IX05 232 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 THEM5Q8N1Q8 247 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 CAMKK1Q8N5S9 505 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 ATAD1Q8NBU5 361 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 TMEM161BQ8NDZ6 487 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 LRRC3Q9BY71 257 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 KIF9Q9HAQ2 790 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 LIMCH1Q9UPQ0 1083 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 CACNA1GO43497 2377 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 USP24Q9UPU5 2620 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
CMTM1-211ENST00000528484 OGTO15294 1046 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 PMLP29590 882 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 ABCD1P33897 745 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 PRPHP41219 470 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 CYP4F8P98187 520 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 TNK2Q07912 1038 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 MAPK7Q13164 816 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 NBR1Q14596 966 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 SLC39A12Q504Y0 691 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 N4BP2L1Q5TBK1 243 aaPredicted RBP12.52□□□□□ -0.41
CMTM1-211ENST00000528484 RNF43Q68DV7 783 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 C4orf32Q8N8J7 132 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 CCDC26Q8TAB7 109 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 C2orf15Q8WU43 125 aaKnown RBP12.52□□□□□ -0.41
CMTM1-211ENST00000528484 SENP8Q96LD8 212 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 CRISPLD1Q9H336 500 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 VPS45Q9NRW7 570 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 KIF3AQ9Y496 699 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 ASPMQ8IZT6 3477 aa12.52□□□□□ -0.41
CMTM1-211ENST00000528484 PP2D1A8MPX8 630 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 EXTL3O43909 919 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 SOAT2O75908 522 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 RHOBTB1O94844 696 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 VNN2O95498 520 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 PRAMEF12O95522 483 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 DRD1P21728 446 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 MPLP40238 635 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 PXNP49023 591 aaPredicted RBP12.51□□□□□ -0.41
CMTM1-211ENST00000528484 LILRA4P59901 499 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 SHC2P98077 582 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 RUNX3Q13761 415 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 CCDC6Q16204 474 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 FBXO43Q4G163 708 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 KBTBD6Q86V97 674 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 CMTM8Q8IZV2 173 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
CMTM1-211ENST00000528484 SPPL2BQ8TCT7 592 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 LPIN3Q9BQK8 851 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 MKNK1Q9BUB5 465 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 GKN1Q9NS71 199 aa12.51□□□□□ -0.41
CMTM1-211ENST00000528484 MEFVO15553 781 aaPredicted RBP12.5□□□□□ -0.41
CMTM1-211ENST00000528484 KRT18P05783 430 aaKnown RBP12.5□□□□□ -0.41
CMTM1-211ENST00000528484 CDC25AP30304 524 aa12.5□□□□□ -0.41
CMTM1-211ENST00000528484 TMEM132DQ14C87 1099 aa12.5□□□□□ -0.41
CMTM1-211ENST00000528484 PDGFRLQ15198 375 aa12.5□□□□□ -0.41
CMTM1-211ENST00000528484 ZBTB6Q15916 424 aa12.5□□□□□ -0.41
CMTM1-211ENST00000528484 ENOX2Q16206 610 aaKnown RBP12.5□□□□□ -0.41
CMTM1-211ENST00000528484 TMEM196Q5HYL7 178 aa12.5□□□□□ -0.41
CMTM1-211ENST00000528484 DAB2IPQ5VWQ8 1189 aa12.5□□□□□ -0.41
CMTM1-211ENST00000528484 SPATA1Q5VX52 437 aa12.5□□□□□ -0.41
CMTM1-211ENST00000528484 C11orf74Q86VG3 221 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms