RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 PMLP29590 882 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 CARSP49589 748 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ITIH4Q14624 930 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 SLC15A2Q16348 729 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 P3H1Q32P28 736 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 PREPLQ4J6C6 727 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 TMEM119Q4V9L6 283 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ATF7IP2Q5U623 682 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 C1orf146Q5VVC0 180 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 MFSD14CQ5VZR4 134 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 TRIM65Q6PJ69 517 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 TRAF7Q6Q0C0 670 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ATG4CQ96DT6 458 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ZNF668Q96K58 619 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 MCEEQ96PE7 176 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 CCDC28BQ9BUN5 200 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 MBD2Q9UBB5 411 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 AGAP1Q9UPQ3 857 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 PEAK1Q9H792 1746 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 FAM237AA0A1B0GTK4 181 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 XPAP23025 273 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 SHMT1P34896 483 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 RPS6P62753 249 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 GUCY1A3Q02108 690 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 MYBPC2Q14324 1141 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ACAD10Q6JQN1 1059 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 COL23A1Q86Y22 540 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 EGFL6Q8IUX8 553 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 NOA1Q8NC60 698 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ST13P5Q8NFI4 369 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 SKA2Q8WVK7 121 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 NIF3L1Q9GZT8 377 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 PRMT7Q9NVM4 692 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 DLGAP2Q9P1A6 1054 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 HACL1Q9UJ83 578 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ALG6Q9Y672 507 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 PARP4Q9UKK3 1724 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 MRC1P22897 1456 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 CFAP69A5D8W1 941 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 HBP1O60381 514 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ZC3H11AO75152 810 aaKnown RBP eCLIP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 PLEKP08567 350 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 MAPTP10636 758 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ARHGDIAP52565 204 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 TUBA1BP68363 451 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 NFIAQ12857 509 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 GJB7Q6PEY0 223 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 C4orf50Q6ZRC1 276 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 C15orf52Q6ZUT6 534 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 TUBA1AQ71U36 451 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 RYBPQ8N488 228 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 CCT8L2Q96SF2 557 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 KATNAL1Q9BW62 490 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 MAGEB5Q9BZ81 275 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 TRPC7Q9HCX4 862 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 GGA3Q9NZ52 723 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 PPARGC1AQ9UBK2 798 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 DBR1Q9UK59 544 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 GTF3C4Q9UKN8 822 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 G3BP2Q9UN86 482 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 CARD8Q9Y2G2 431 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 AP3B1O00203 1094 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 EPHB1P54762 984 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 RAB15P59190 212 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 TBX2Q13207 712 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ACAD11Q709F0 780 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 APPL2Q8NEU8 664 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ARHGEF26Q96DR7 871 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 FAM163AQ96GL9 167 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 PRMT6Q96LA8 375 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 QKIQ96PU8 341 aaKnown RBP eCLIP7.55□□□□□ -1.22e-8■■□□□ 14.5
CTNND1-218ENST00000528232 GCNAQ96QF7 691 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 SH2D3AQ9BRG2 576 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ERP44Q9BS26 406 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 DEFB129Q9H1M3 183 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 SMARCAL1Q9NZC9 954 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 NAGPAQ9UK23 515 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ABT1Q9ULW3 272 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 TRIM33Q9UPN9 1127 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 GTPBP10A4D1E9 387 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 PSTPIP1O43586 416 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 CBFA2T3O75081 653 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 RHOBTB1O94844 696 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 LCP1P13796 627 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 MAP4P27816 1152 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 SULT1E1P49888 294 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 TBL3Q12788 808 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 OMA1Q96E52 524 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 ZSWIM1Q9BR11 485 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 KDM4CQ9H3R0 1056 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 CAAP1Q9H8G2 361 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 PKD2L2Q9NZM6 624 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 BFARQ9NZS9 450 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 WARS2Q9UGM6 360 aaKnown RBP7.55□□□□□ -1.2
CTNND1-218ENST00000528232 CHMP2BQ9UQN3 213 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 INPP5FQ9Y2H2 1132 aa7.55□□□□□ -1.2
CTNND1-218ENST00000528232 FAM208AQ9UK61 1670 aaKnown RBP7.54□□□□□ -1.2
CTNND1-218ENST00000528232 RSPH10B2B2RC85 870 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 DNAJC6O75061 913 aa7.54□□□□□ -1.2
CTNND1-218ENST00000528232 RASSF9O75901 435 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms