RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 FGF13Q92913 245 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 FNBP1Q96RU3 617 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 MTMR12Q9C0I1 747 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 ZCWPW1Q9H0M4 648 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 KCTD10Q9H3F6 313 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 SIX4Q9UIU6 781 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 CIZ1Q9ULV3 898 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 DUSP12Q9UNI6 340 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 MRPS23Q9Y3D9 190 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 HCN4Q9Y3Q4 1203 aa13.04□□□□□ -0.32
TRAPPC4-209ENST00000528230 MTMR11A4FU01 709 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 EXOC3O60645 756 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 HUS1O60921 280 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 FAM163BP0C2L3 166 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 OR4Q2P0C623 313 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 TNNI1P19237 187 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 ALDH1A3P47895 512 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 TUFMP49411 452 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 EPHA5P54756 1037 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 TWF1Q12792 350 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 DUSP4Q13115 394 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 CYP4A22Q5TCH4 519 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 MTSS1LQ765P7 747 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 TRAPPC11Q7Z392 1133 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 DCP1BQ8IZD4 617 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 FMR1NBQ8N0W7 255 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 TOP6BLQ8N6T0 577 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 ENGASEQ8NFI3 743 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 ITFG1Q8TB96 612 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 HPDLQ96IR7 371 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 RTP3Q9BQQ7 232 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 ACBD6Q9BR61 282 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 KCNH6Q9H252 994 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 GDE1Q9NZC3 331 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 CEP72Q9P209 647 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 TRAF3IP3Q9Y228 551 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 ASB3Q9Y575 518 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 PTPRJQ12913 1337 aa13.03□□□□□ -0.32
TRAPPC4-209ENST00000528230 CALUO43852 315 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 DLATP10515 647 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 LHX1P48742 406 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 AP3M2P53677 418 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 EPHB3P54753 998 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 CLDN10P78369 228 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 MYL7Q01449 175 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 BFSP1Q12934 665 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 SNW1Q13573 536 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 HTR4Q13639 388 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 NFIL3Q16649 462 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 PRSS36Q5K4E3 855 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 LMBRD2Q68DH5 695 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 LIMS2Q7Z4I7 341 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 NPAS3Q8IXF0 933 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 GUF1Q8N442 669 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 PDCL2Q8N4E4 241 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 FBXL6Q8N531 539 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 ATAD1Q8NBU5 361 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 SPPL2BQ8TCT7 592 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 CCDC127Q96BQ5 260 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 TIGD1Q96MW7 591 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 TMEM209Q96SK2 561 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 CORO1BQ9BR76 489 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 L1RE1Q9UN81 338 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 YIPF1Q9Y548 306 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 SNX9Q9Y5X1 595 aa13.02□□□□□ -0.33
TRAPPC4-209ENST00000528230 GABRDO14764 452 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 MAPK13O15264 365 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 NR3C1P04150 777 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 SRFP11831 508 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 TSPY1Q01534 308 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 FAM160A1Q05DH4 1040 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 NFE2Q16621 373 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 SLC5A9Q2M3M2 681 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 SLC39A12Q504Y0 691 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 SCARA3Q6AZY7 606 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 PDZD4Q76G19 769 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 LRRTM3Q86VH5 581 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 SUGP1Q8IWZ8 645 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 ELOA2Q8IYF1 753 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 PARD3BQ8TEW8 1205 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 RSAD2Q8WXG1 361 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 ZNF516Q92618 1163 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 GPR88Q9GZN0 384 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 GZF1Q9H116 711 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 CRISPLD1Q9H336 500 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 SMOC2Q9H3U7 446 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 ASAH2Q9NR71 780 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 RMND1Q9NWS8 449 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 DDX43Q9NXZ2 648 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 WNT16Q9UBV4 365 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 SLC27A5Q9Y2P5 690 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 NUMBLQ9Y6R0 609 aa13.01□□□□□ -0.33
TRAPPC4-209ENST00000528230 ZNF318Q5VUA4 2279 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 FGF19O95750 216 aa13□□□□□ -0.33
TRAPPC4-209ENST00000528230 CST3P01034 146 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-209ENST00000528230 HAPLN1P10915 354 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms