RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 NARSO43776 548 aaKnown RBP35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 NUBP1P53384 320 aa35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 STK4Q13043 487 aa35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 KMT5BQ4FZB7 885 aa35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 CYP4A22Q5TCH4 519 aa35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 PARM1Q6UWI2 310 aa35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 PDZD4Q76G19 769 aaPredicted RBP35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 FSIP1Q8NA03 581 aa35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 ATAD1Q8NBU5 361 aa35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 KIAA0895Q8NCT3 520 aa35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 C2orf15Q8WU43 125 aaKnown RBP35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 CRISPLD1Q9H336 500 aa35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 SLC2A4RGQ9NR83 387 aa35.58■■■■□ 3.29
SSSCA1-205ENST00000527920 PTPRJQ12913 1337 aa35.57■■■■□ 3.29
SSSCA1-205ENST00000527920 PRPF40AO75400 957 aaKnown RBP35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 TNNC2P02585 160 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 AVPR2P30518 371 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 CYP2J2P51589 502 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 PSMD6Q15008 389 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 TMEM86AQ8N2M4 240 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 OR5B17Q8NGF7 314 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 ING5Q8WYH8 240 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 FAM122AQ96E09 287 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 ASAH2Q9NR71 780 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 FBXL21Q9UKT6 434 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 ASB3Q9Y575 518 aa35.57■■■■□ 3.28
SSSCA1-205ENST00000527920 TULP1O00294 542 aaPredicted RBP35.56■■■■□ 3.28
SSSCA1-205ENST00000527920 CLIC2O15247 247 aa35.56■■■■□ 3.28
SSSCA1-205ENST00000527920 ALDH1A3P47895 512 aa35.56■■■■□ 3.28
SSSCA1-205ENST00000527920 EPHB3P54753 998 aa35.56■■■■□ 3.28
SSSCA1-205ENST00000527920 CYP24A1Q07973 514 aa35.56■■■■□ 3.28
SSSCA1-205ENST00000527920 PDCL2Q8N4E4 241 aa35.56■■■■□ 3.28
SSSCA1-205ENST00000527920 HUS1O60921 280 aa35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 KRT19P08727 400 aa35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 CEBPBP17676 345 aa35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 VCPP55072 806 aaKnown RBP35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 BFSP1Q12934 665 aa35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 MYO1EQ12965 1108 aa35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 SLC39A12Q504Y0 691 aa35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 LMBRD2Q68DH5 695 aaPredicted RBP35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 FAM84AQ96KN4 292 aa35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 MFSD1Q9H3U5 465 aa35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 L1RE1Q9UN81 338 aa35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 R3HCC1Q9Y3T6 440 aaKnown RBP35.55■■■■□ 3.28
SSSCA1-205ENST00000527920 RPN1P04843 607 aaKnown RBP35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 CCR2P41597 374 aa35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 TUFMP49411 452 aaKnown RBP35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 CLCN5P51795 746 aa35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 KRBA2Q6ZNG9 492 aa35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 DCP1BQ8IZD4 617 aaKnown RBP35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 TOP6BLQ8N6T0 577 aa35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 SPPL2BQ8TCT7 592 aa35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 TCEAL4Q96EI5 215 aa35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 FNBP1Q96RU3 617 aa35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 CGRRF1Q99675 332 aa35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 DNAJC25Q9H1X3 360 aa35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 GOLPH3LQ9H4A5 285 aa35.54■■■■□ 3.28
SSSCA1-205ENST00000527920 TCHHQ07283 1943 aa35.53■■■■□ 3.28
SSSCA1-205ENST00000527920 ECI2O75521 394 aa35.53■■■■□ 3.28
SSSCA1-205ENST00000527920 ASTLQ6HA08 431 aaPredicted RBP35.53■■■■□ 3.28
SSSCA1-205ENST00000527920 DPH6Q7L8W6 267 aa35.53■■■■□ 3.28
SSSCA1-205ENST00000527920 SLC9A9Q8IVB4 645 aa35.53■■■■□ 3.28
SSSCA1-205ENST00000527920 SIX5Q8N196 739 aa35.53■■■■□ 3.28
SSSCA1-205ENST00000527920 RPP25Q9BUL9 199 aaKnown RBP35.53■■■■□ 3.28
SSSCA1-205ENST00000527920 GDPD2Q9HCC8 539 aa35.53■■■■□ 3.28
SSSCA1-205ENST00000527920 SLC27A5Q9Y2P5 690 aa35.53■■■■□ 3.28
SSSCA1-205ENST00000527920 KMT2EQ8IZD2 1858 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 TSPY1Q01534 308 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 SCARA3Q6AZY7 606 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 LIMS2Q7Z4I7 341 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 HS6ST3Q8IZP7 471 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 RDH13Q8NBN7 331 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 CCDC47Q96A33 483 aaKnown RBP35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 MCRS1Q96EZ8 462 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 HPDLQ96IR7 371 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 ACBD6Q9BR61 282 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 LRRC3Q9BY71 257 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 KCTD10Q9H3F6 313 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 DMAC2Q9NW81 257 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 SNX9Q9Y5X1 595 aa35.52■■■■□ 3.28
SSSCA1-205ENST00000527920 MOSPD3O75425 235 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 RHOBTB3O94955 611 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 CFHP08603 1231 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 DLATP10515 647 aaKnown RBP35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 DPYDQ12882 1025 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 IER5LQ5T953 404 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 TRAPPC11Q7Z392 1133 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 ITIH5Q86UX2 942 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 LRRTM3Q86VH5 581 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 TMC8Q8IU68 726 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 TTC9BQ8N6N2 239 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 PSMG2Q969U7 264 aa35.51■■■■□ 3.28
SSSCA1-205ENST00000527920 PDXKO00764 312 aa35.5■■■■□ 3.27
SSSCA1-205ENST00000527920 EXOC3O60645 756 aa35.5■■■■□ 3.27
SSSCA1-205ENST00000527920 ZNF202O95125 648 aa35.5■■■■□ 3.27
SSSCA1-205ENST00000527920 KIF20AO95235 890 aa35.5■■■■□ 3.27
SSSCA1-205ENST00000527920 NPR3P17342 541 aa35.5■■■■□ 3.27
SSSCA1-205ENST00000527920 NFE2Q16621 373 aaPredicted RBP35.5■■■■□ 3.27
SSSCA1-205ENST00000527920 POTEHQ6S545 545 aa35.5■■■■□ 3.27
SSSCA1-205ENST00000527920 GPR152Q8TDT2 470 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms