RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 HPSEQ9Y251 543 aa16.74■□□□□ 0.27
CAPN1-213ENST00000527897 PTPRJQ12913 1337 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 ANHXE9PGG2 379 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 KLRC4O43908 158 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 HUS1O60921 280 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 VNN2O95498 520 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 SRFP11831 508 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 AVPR2P30518 371 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 PLA2G5P39877 138 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 EPHB3P54753 998 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 RBP5P82980 135 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 SURF1Q15526 300 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 SNRNP35Q16560 246 aaKnown RBP16.73■□□□□ 0.27
CAPN1-213ENST00000527897 KNOP1Q1ED39 458 aaKnown RBP16.73■□□□□ 0.27
CAPN1-213ENST00000527897 MGAT5BQ3V5L5 792 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 XXYLT1Q8NBI6 393 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 FAM200AQ8TCP9 573 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 CCDC127Q96BQ5 260 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 BORCS6Q96GS4 357 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 FNBP1Q96RU3 617 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 ASAH2Q9NR71 780 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 SIX4Q9UIU6 781 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 SNX9Q9Y5X1 595 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 KMT2EQ8IZD2 1858 aa16.73■□□□□ 0.27
CAPN1-213ENST00000527897 ZNF197O14709 1029 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 EXOC3O60645 756 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 RPN1P04843 607 aaKnown RBP16.72■□□□□ 0.27
CAPN1-213ENST00000527897 GJA1P17302 382 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 TNNI1P19237 187 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 STK4Q13043 487 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 PLD1Q13393 1074 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 DUOXA2Q1HG44 320 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 CENPPQ6IPU0 288 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 LRRC52Q8N7C0 313 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 GPR152Q8TDT2 470 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 RTP3Q9BQQ7 232 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 ZCWPW1Q9H0M4 648 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 GOLPH3LQ9H4A5 285 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 SLITRK6Q9H5Y7 841 aa16.72■□□□□ 0.27
CAPN1-213ENST00000527897 ABI2Q9NYB9 513 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-213ENST00000527897 CLSTN1O94985 981 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 ACAT1P24752 427 aaKnown RBP16.71■□□□□ 0.27
CAPN1-213ENST00000527897 CCR2P41597 374 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 CYP24A1Q07973 514 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 MYO1EQ12965 1108 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 BMT2Q1RMZ1 405 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 PRSS36Q5K4E3 855 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 WDR49Q8IV35 697 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 PDCL2Q8N4E4 241 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 KIAA0895Q8NCT3 520 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 CCDC47Q96A33 483 aaKnown RBP16.71■□□□□ 0.27
CAPN1-213ENST00000527897 GDE1Q9NZC3 331 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 L1RE1Q9UN81 338 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 MUC6Q6W4X9 2439 aa16.71■□□□□ 0.27
CAPN1-213ENST00000527897 A0A1W2PQ27 194 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 A0A1W2PQ64 194 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 A0A1W2PQD8 194 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 GOLGA6L4A6NEF3 574 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 NRG2O14511 850 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-213ENST00000527897 SNRPFP62306 86 aaKnown RBP16.7■□□□□ 0.26
CAPN1-213ENST00000527897 GPC5P78333 572 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 NUCB2P80303 420 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 TSPY1Q01534 308 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 PSMD2Q13200 908 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 ASTLQ6HA08 431 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-213ENST00000527897 LRRTM3Q86VH5 581 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 DCP1BQ8IZD4 617 aaKnown RBP16.7■□□□□ 0.26
CAPN1-213ENST00000527897 HPDLQ96IR7 371 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 LPIN3Q9BQK8 851 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 DNAJC25Q9H1X3 360 aa16.7■□□□□ 0.26
CAPN1-213ENST00000527897 AVENQ9NQS1 362 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-213ENST00000527897 DDX43Q9NXZ2 648 aaKnown RBP16.7■□□□□ 0.26
CAPN1-213ENST00000527897 CGNQ9P2M7 1197 aaKnown RBP16.7■□□□□ 0.26
CAPN1-213ENST00000527897 ARIH1Q9Y4X5 557 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-213ENST00000527897 A0A1W2PRU2 124 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 KRBA1A5PL33 1030 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 ZNF202O95125 648 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 MYL1P05976 194 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 MYL7Q01449 175 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 VEPH1Q14D04 833 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 PSMD6Q15008 389 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 TEAD2Q15562 447 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 TAF12Q16514 161 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 TANGO2Q6ICL3 276 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 POTEHQ6S545 545 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 KRBA2Q6ZNG9 492 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 TRAPPC11Q7Z392 1133 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 ADGRF2Q8IZF7 708 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 TMEM105Q8N8V8 129 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 PRSS33Q8NF86 280 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 CXorf38Q8TB03 319 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 GOLGA5Q8TBA6 731 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 GIPC2Q8TF65 315 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 MMS19Q96T76 1030 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 CGRRF1Q99675 332 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 KCNH6Q9H252 994 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 TMLHEQ9NVH6 421 aa16.69■□□□□ 0.26
CAPN1-213ENST00000527897 WNT16Q9UBV4 365 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms