RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 KIAA0754O94854 1291 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 TXNP10599 105 aaKnown RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 BRD2P25440 801 aaKnown RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 ADCY8P40145 1251 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 RPL7AP62424 266 aaKnown RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 DAB2IPQ5VWQ8 1189 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 SCARA3Q6AZY7 606 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 GPAT2Q6NUI2 795 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 EFCAB12Q6NXP0 572 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 RELL1Q8IUW5 271 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 FBXO16Q8IX29 292 aaPredicted RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 SERPINB12Q96P63 405 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 DDX56Q9NY93 547 aaKnown RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 INO80B-WBP1J3KQ70 363 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 MED7O43513 233 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 TJP3O95049 919 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 ATP5DP30049 168 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 POLR2BP30876 1174 aaKnown RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 SSR1P43307 286 aaKnown RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 MBTD1Q05BQ5 628 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 AUHQ13825 339 aaKnown RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 FAM187BQ17R55 369 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 ZNF484Q5JVG2 852 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 DCUN1D2Q6PH85 259 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 TADA2BQ86TJ2 420 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 ERICH1Q86X53 443 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 THNSL1Q8IYQ7 743 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 SLITRK1Q96PX8 696 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 XPO6Q96QU8 1125 aaKnown RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 INO80BQ9C086 356 aaPredicted RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 LHX5Q9H2C1 402 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 PRMT7Q9NVM4 692 aaPredicted RBP16.25■□□□□ 0.19
USH1C-207ENST00000527720 ERAP1Q9NZ08 941 aa16.25■□□□□ 0.19
USH1C-207ENST00000527720 TTC4O95801 387 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 SLC20A2Q08357 652 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 ZNF252P-AS1Q0IIN9 211 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 EPS8L3Q8TE67 593 aaKnown RBP16.24■□□□□ 0.19
USH1C-207ENST00000527720 CDCA5Q96FF9 252 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 NLRP4Q96MN2 994 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 MCEEQ96PE7 176 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 BCO2Q9BYV7 579 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 RPF1Q9H9Y2 349 aaKnown RBP16.24■□□□□ 0.19
USH1C-207ENST00000527720 PLXNB2O15031 1838 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 TCEA3O75764 348 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 CPP00450 1065 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 GSCP56915 257 aaPredicted RBP16.24■□□□□ 0.19
USH1C-207ENST00000527720 TNFAIP2Q03169 654 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 TMEM132AQ24JP5 1023 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 POLNQ7Z5Q5 900 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 IFNLR1Q8IU57 520 aaPredicted RBP16.24■□□□□ 0.19
USH1C-207ENST00000527720 WDTC1Q8N5D0 677 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 GTF3C2Q8WUA4 911 aaPredicted RBP16.24■□□□□ 0.19
USH1C-207ENST00000527720 CDT1Q9H211 546 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 ADAM7Q9H2U9 754 aa16.24■□□□□ 0.19
USH1C-207ENST00000527720 CITO14578 2027 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 NDC80O14777 642 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 GJB6O95452 261 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 C22orf31O95567 290 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 WEE2P0C1S8 567 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 CHN1P15882 459 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 KLRC2P26717 231 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 CHKAP35790 457 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 PHKA2P46019 1235 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 LACTBP83111 547 aaPredicted RBP16.23■□□□□ 0.19
USH1C-207ENST00000527720 UBAP2Q5T6F2 1119 aaKnown RBP16.23■□□□□ 0.19
USH1C-207ENST00000527720 C6orf89Q6UWU4 347 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 TRAPPC12Q8WVT3 735 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 CCDC134Q9H6E4 229 aa16.23■□□□□ 0.19
USH1C-207ENST00000527720 DRG1Q9Y295 367 aaKnown RBP16.23■□□□□ 0.19
USH1C-207ENST00000527720 ANKRD65E5RJM6 399 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 LIASO43766 372 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 KRT1P04264 644 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 GJC1P36383 396 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 IFI35P80217 286 aaPredicted RBP16.22■□□□□ 0.19
USH1C-207ENST00000527720 TTLL12Q14166 644 aaPredicted RBP16.22■□□□□ 0.19
USH1C-207ENST00000527720 KYAT1Q16773 422 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 ZNF394Q53GI3 561 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 ZNF667Q5HYK9 610 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 EEF1DP3Q658K8 133 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 IPO4Q8TEX9 1081 aaKnown RBP16.22■□□□□ 0.19
USH1C-207ENST00000527720 FNIP1Q8TF40 1166 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 ZC3H15Q8WU90 426 aaKnown RBP16.22■□□□□ 0.19
USH1C-207ENST00000527720 TFAP2BQ92481 460 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 COPS5Q92905 334 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 OPTNQ96CV9 577 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 CHMP6Q96FZ7 201 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 SMIM23A6NLE4 172 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 MAGEB2O15479 319 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 B4GALT5O43286 388 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 MCF2P10911 925 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 CLCN3P51790 818 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 LAMC2Q13753 1193 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 TRIP13Q15645 432 aaPredicted RBP16.22■□□□□ 0.19
USH1C-207ENST00000527720 SPOCD1Q6ZMY3 1216 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 OTUD6BQ8N6M0 293 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 SELENOSQ9BQE4 189 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 DDX23Q9BUQ8 820 aaKnown RBP16.22■□□□□ 0.19
USH1C-207ENST00000527720 RNF181Q9P0P0 153 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 WDR35Q9P2L0 1181 aa16.22■□□□□ 0.19
USH1C-207ENST00000527720 EFR3BQ9Y2G0 817 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms