RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	ALOX15	P16050	662 aa	Predicted RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ATP5J	P18859	108 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CNGA1	P29973	690 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PSMC4	P43686	418 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	NUCB1	Q02818	461 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CBX3	Q13185	183 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	BLMH	Q13867	455 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	DHX8	Q14562	1220 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	INA	Q16352	499 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TUBB8	Q3ZCM7	444 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	C4orf46	Q504U0	113 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SMUG1	Q53HV7	270 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	COBLL1	Q53SF7	1204 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CATSPERE	Q5SY80	951 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	THOC7	Q6I9Y2	204 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	NAA16	Q6N069	864 aa	Predicted RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	B4GALNT4	Q76KP1	1039 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	BZW1	Q7L1Q6	419 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TRMT2A	Q8IZ69	625 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SLC7A5P1	Q8MH63	180 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CLASRP	Q8N2M8	674 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PLA2G15	Q8NCC3	412 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CNNM3	Q8NE01	707 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CPT1C	Q8TCG5	803 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TRPC4AP	Q8TEL6	797 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SREK1	Q8WXA9	508 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ST8SIA2	Q92186	375 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PMM1	Q92871	262 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZNF669	Q96BR6	464 aa	Predicted RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	LRRC45	Q96CN5	670 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	MRRF	Q96E11	262 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TTC14	Q96N46	770 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ANKRD27	Q96NW4	1050 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	GSDMA	Q96QA5	445 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SPAG5	Q96R06	1193 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	FOXB1	Q99853	325 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	FUCA2	Q9BTY2	467 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	OSBPL10	Q9BXB5	764 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CAPS2	Q9BXY5	557 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	UPF3B	Q9BZI7	483 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SLC7A5P2	Q9GIP4	190 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CCDC68	Q9H2F9	335 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	BHMT2	Q9H2M3	363 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	MRPL46	Q9H2W6	279 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SYNC	Q9H7C4	482 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	IGSF5	Q9NSI5	407 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	VPS18	Q9P253	973 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ATXN10	Q9UBB4	475 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	GGA2	Q9UJY4	613 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SORCS3	Q9UPU3	1222 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZNF148	Q9UQR1	794 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PCDHA9	Q9Y5H5	950 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	BZW2	Q9Y6E2	419 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	BCORL1	Q5H9F3	1711 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TOP2A	P11388	1531 aa	Known RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	FAM135A	Q9P2D6	1515 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PHLPP2	Q6ZVD8	1323 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SH3TC1	Q8TE82	1336 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PABPN1L	A6NDY0	278 aa	Known RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ANKRD65	E5RJM6	399 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PROB1	E7EW31	1015 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZNF185	O15231	689 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	P4HA2	O15460	535 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	KLF4	O43474	513 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	MTA2	O94776	668 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TOX4	O94842	621 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	KIAA0754	O94854	1291 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SEC31A	O94979	1220 aa	Known RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	NPTXR	O95502	500 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	JUN	P05412	331 aa	Known RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TUBB	P07437	444 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	VIM	P08670	466 aa	Known RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PDGFRB	P09619	1106 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	LAG3	P18627	525 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	MX1	P20591	662 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	GNAQ	P50148	359 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SH3BGR	P55822	239 aa	Predicted RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TUBB4B	P68371	445 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SEPT7	Q16181	437 aa	Known RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	DGKD	Q16760	1214 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	LONRF2	Q1L5Z9	754 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	LCE1A	Q5T7P2	110 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	AGAP9	Q5VTM2	703 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	FBXO42	Q6P3S6	717 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	NEK10	Q6ZWH5	1172 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	LRP10	Q7Z4F1	713 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	NANOGNB	Q7Z5D8	188 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	C11orf96	Q7Z7L8	435 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CLEC14A	Q86T13	490 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CEP57	Q86XR8	500 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SLC15A3	Q8IY34	581 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SYCP3	Q8IZU3	236 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CCAR2	Q8N163	923 aa	Known RBP	4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	LRRC43	Q8N309	656 aa		4.05	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TTC39C	Q8N584	583 aa		4.05	□□□□□ -1.76

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