RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 LIMA1Q9UHB6 759 aaKnown RBP12.68□□□□□ -0.38
PSMD13-206ENST00000527047 PUF60Q9UHX1 559 aaKnown RBP12.68□□□□□ -0.38
PSMD13-206ENST00000527047 NUB1Q9Y5A7 615 aa12.68□□□□□ -0.38
PSMD13-206ENST00000527047 IRAK3Q9Y616 596 aa12.68□□□□□ -0.38
PSMD13-206ENST00000527047 GTPBP10A4D1E9 387 aaKnown RBP12.67□□□□□ -0.38
PSMD13-206ENST00000527047 SYN3O14994 580 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 N4BP1O75113 896 aaKnown RBP12.67□□□□□ -0.38
PSMD13-206ENST00000527047 PHACTR2O75167 634 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 AFPP02771 609 aaKnown RBP12.67□□□□□ -0.38
PSMD13-206ENST00000527047 CYP11A1P05108 521 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 CTSAP10619 480 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 ATP1A3P13637 1013 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 MTIF2P46199 727 aaKnown RBP12.67□□□□□ -0.38
PSMD13-206ENST00000527047 ERVFC1P60507 584 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 DSG1Q02413 1049 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 MYO1EQ12965 1108 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 TRPC3Q13507 836 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 SGSM1Q2NKQ1 1148 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 VWA3BQ502W6 1294 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 FAM171A1Q5VUB5 890 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 KIAA0319Q5VV43 1072 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.67□□□□□ -0.38
PSMD13-206ENST00000527047 TAF4BQ92750 862 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 MRPL38Q96DV4 380 aaKnown RBP12.67□□□□□ -0.38
PSMD13-206ENST00000527047 B3GALT6Q96L58 329 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 SENP8Q96LD8 212 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 NDST4Q9H3R1 872 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 PRDM12Q9H4Q4 367 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 MMRN2Q9H8L6 949 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 TLR9Q9NR96 1032 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 RAB20Q9NX57 234 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 LMCD1Q9NZU5 365 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 SZT2Q5T011 3432 aa12.67□□□□□ -0.38
PSMD13-206ENST00000527047 BECN2A8MW95 431 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 CD46P15529 392 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 TYMPP19971 482 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 TKTP29401 623 aaKnown RBP12.66□□□□□ -0.38
PSMD13-206ENST00000527047 IRS1P35568 1242 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 PIK3CAP42336 1068 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 MYL7Q01449 175 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 MRPL58Q14197 206 aaKnown RBP12.66□□□□□ -0.38
PSMD13-206ENST00000527047 ADGRE1Q14246 886 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 USP41Q3LFD5 358 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 RTP2Q5QGT7 225 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 PDE12Q6L8Q7 609 aaKnown RBP12.66□□□□□ -0.38
PSMD13-206ENST00000527047 Q7L0L9 218 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 CREBRFQ8IUR6 639 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 PIK3R5Q8WYR1 880 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 TCF25Q9BQ70 676 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 PI4K2AQ9BTU6 479 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 TTPALQ9BTX7 342 aa12.66□□□□□ -0.38
PSMD13-206ENST00000527047 APOBEC3GQ9HC16 384 aaKnown RBP12.66□□□□□ -0.38
PSMD13-206ENST00000527047 BRWD1Q9NSI6 2320 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 CYB561D2O14569 222 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 TBC1D4O60343 1298 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 OAZ2O95190 189 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.38
PSMD13-206ENST00000527047 COPB1P53618 953 aaKnown RBP12.65□□□□□ -0.38
PSMD13-206ENST00000527047 NOP14P78316 857 aaKnown RBP12.65□□□□□ -0.38
PSMD13-206ENST00000527047 LAPTM4AQ15012 233 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 PTPN14Q15678 1187 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 SOWAHAQ2M3V2 549 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 ZNF699Q32M78 642 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 WDR72Q3MJ13 1102 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 SPOPLQ6IQ16 392 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 DSTYKQ6XUX3 929 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 DPH6Q7L8W6 267 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 GAS2L3Q86XJ1 694 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 TOP6BLQ8N6T0 577 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 MRPL43Q8N983 215 aaKnown RBP12.65□□□□□ -0.38
PSMD13-206ENST00000527047 LNX1Q8TBB1 728 aaPredicted RBP12.65□□□□□ -0.38
PSMD13-206ENST00000527047 SPATA18Q8TC71 538 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 ELMO3Q96BJ8 720 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 FAXDC2Q96IV6 333 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 FAM161BQ96MY7 647 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 GUCD1Q96NT3 240 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 BCO2Q9BYV7 579 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 NGRNQ9NPE2 291 aaKnown RBP12.65□□□□□ -0.38
PSMD13-206ENST00000527047 MTMR10Q9NXD2 777 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 TAB2Q9NYJ8 693 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 PCDHGC5Q9Y5F6 944 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 SNX9Q9Y5X1 595 aa12.65□□□□□ -0.38
PSMD13-206ENST00000527047 MTCL1Q9Y4B5 1905 aaKnown RBP12.64□□□□□ -0.39
PSMD13-206ENST00000527047 ARHGEF37A1IGU5 675 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 C2orf71A6NGG8 1288 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 LGALS16A8MUM7 142 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 HIDE1A8MVS5 230 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 NRG2O14511 850 aaPredicted RBP12.64□□□□□ -0.39
PSMD13-206ENST00000527047 GABRDO14764 452 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 URODP06132 367 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 ODC1P11926 461 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 ASPAP45381 313 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 GLUD2P49448 558 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 KCNMA1Q12791 1236 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
PSMD13-206ENST00000527047 PTPROQ16827 1216 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 ZNF667Q5HYK9 610 aa12.64□□□□□ -0.39
PSMD13-206ENST00000527047 WSCD1Q658N2 575 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms