RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 PIK3CAP42336 1068 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 ADKP55263 362 aaKnown RBP13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 POLR2FP61218 127 aaKnown RBP13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 ZBED6P86452 979 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 TRPC3Q13507 836 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 BMS1Q14692 1282 aaKnown RBP13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 TMEM132DQ14C87 1099 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 WDR44Q5JSH3 913 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 TMEM31Q5JXX7 168 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 TDRD10Q5VZ19 366 aaKnown RBP13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 JADE1Q6IE81 842 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 TRAPPC11Q7Z392 1133 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 RNF135Q8IUD6 432 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 LRRC8AQ8IWT6 810 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 OR5B17Q8NGF7 314 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 TAS1R2Q8TE23 839 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 SNX27Q96L92 541 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 KLHL5Q96PQ7 755 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 APOL5Q9BWW9 433 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 IMPG2Q9BZV3 1241 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 TTYH3Q9C0H2 523 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 NUCKS1Q9H1E3 243 aaKnown RBP13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 CXCL16Q9H2A7 254 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 KLK14Q9P0G3 267 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 STK39Q9UEW8 545 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 RAPGEFL1Q9UHV5 662 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 FBXL5Q9UKA1 691 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 PRG3Q9Y2Y8 225 aaPredicted RBP13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 R3HCC1Q9Y3T6 440 aaKnown RBP13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 C2CD2Q9Y426 696 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 MYO10Q9HD67 2058 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 PTPRJQ12913 1337 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 TECTAO75443 2155 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 FAM86C2PA6NEL3 165 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 DCXO43602 365 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 NOL4O94818 638 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 HLA-DRAP01903 254 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 SOD2P04179 222 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 CNPP09543 421 aaKnown RBP13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 SRGAP2BP0DMP2 458 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 UCHL3P15374 230 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 EPCAMP16422 314 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 OR1G1P47890 313 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 NAB2Q15742 525 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 KIAA0319Q5VV43 1072 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 EFCAB13Q8IY85 973 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 TC2NQ8N9U0 490 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 OR8K1Q8NGG5 319 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 LMO3Q8TAP4 145 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 FAM81BQ96LP2 452 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 NT5C1BQ96P26 610 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 PANX2Q96RD6 677 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 MTMR12Q9C0I1 747 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 GANQ9H2C0 597 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 ADAM7Q9H2U9 754 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 SIX2Q9NPC8 291 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 NLRC4Q9NPP4 1024 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 ZNHIT6Q9NWK9 470 aaKnown RBP13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 APEX2Q9UBZ4 518 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 CDH22Q9UJ99 828 aa13.61□□□□□ -0.23
SSSCA1-203ENST00000526877 PTGESO14684 152 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 EPHB6O15197 1021 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 CLSTN1O94985 981 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 NFICP08651 508 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 GOLGA8FQ08AF8 430 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 GOLGA8DPQ0D2H9 430 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 LRMPQ12912 555 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 GRIK3Q13003 919 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 NCOA4Q13772 614 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 ARID5BQ14865 1188 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 DPY19L2P1Q6NXN4 242 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 ALKAL1Q6UXT8 129 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 RRAGAQ7L523 313 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 FMNL3Q8IVF7 1028 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 C12orf76Q8N812 135 aaPredicted RBP13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 CCDC112Q8NEF3 446 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 BEST2Q8NFU1 509 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 FEZF2Q8TBJ5 459 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 SEMA4DQ92854 862 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 SPAG5Q96R06 1193 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 RPS6KC1Q96S38 1066 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 HERC2P3Q9BVR0 1158 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 COLEC11Q9BWP8 271 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 GPR62Q9BZJ7 368 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 MRPL17Q9NRX2 175 aaKnown RBP13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 CHST7Q9NS84 486 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 ABHD10Q9NUJ1 306 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 MUTYHQ9UIF7 546 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 DNAJC12Q9UKB3 198 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 MYO6Q9UM54 1294 aa13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.6□□□□□ -0.23
SSSCA1-203ENST00000526877 MEFVO15553 781 aaPredicted RBP13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 VNN1O95497 513 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 KRT19P08727 400 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 KCNE1P15382 129 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 CA8P35219 290 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 CLCN4P51793 760 aa13.59□□□□□ -0.23
SSSCA1-203ENST00000526877 MFAP3P55082 362 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms