RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CCNB1P14635 433 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 PECAM1P16284 738 aaPredicted RBP12.32□□□□□ -0.44
LINC01001-201ENST00000526704 ARSEP51690 589 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 LMNB2Q03252 620 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 CCDC15Q0P6D6 951 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 SPOCD1Q6ZMY3 1216 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 FAM47EQ6ZV65 393 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 TDRPQ86YL5 185 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 CCHCR1Q8TD31 782 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 AGAP11Q8TF27 550 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 N4BP2L2Q92802 583 aaPredicted RBP12.32□□□□□ -0.44
LINC01001-201ENST00000526704 KLHL29Q96CT2 875 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 MSTO1Q9BUK6 570 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 PORCNQ9H237 461 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 EBF2Q9HAK2 575 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 KIF9Q9HAQ2 790 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 GINM1Q9NU53 330 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 KLHL14Q9P2G3 628 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 IVNS1ABPQ9Y6Y0 642 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 WDR90Q96KV7 1748 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 ADGRA2Q96PE1 1338 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 LRRIQ4A6NIV6 560 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 IL9RQ01113 521 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 OGDHQ02218 1023 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 GPS1Q13098 491 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 TXNRD3NBQ6F5E7 133 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 PPP1R2P3Q6NXS1 205 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 DENND1AQ8TEH3 1009 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 ZNF606Q8WXB4 792 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 PRCCQ92733 491 aaPredicted RBP12.32□□□□□ -0.44
LINC01001-201ENST00000526704 GRAMD1AQ96CP6 724 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
LINC01001-201ENST00000526704 TTC25Q96NG3 672 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 MCEEQ96PE7 176 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 TARS2Q9BW92 718 aaKnown RBP12.32□□□□□ -0.44
LINC01001-201ENST00000526704 ZNF148Q9UQR1 794 aa12.32□□□□□ -0.44
LINC01001-201ENST00000526704 A0A0B4J269 797 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 SPATA31C2B4DYI2 1134 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 HGSO14964 777 aaPredicted RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 PRPF4O43172 522 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 TJP3O95049 919 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 MYCNP04198 464 aaPredicted RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 CETN2P41208 172 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 NAMPTP43490 491 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 SP2Q02086 613 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 MCL1Q07820 350 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 NR1H3Q13133 447 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 NCOA4Q13772 614 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 OASLQ15646 514 aaKnown RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 SEZ6Q53EL9 994 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 HP1BP3Q5SSJ5 553 aaPredicted RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 SPOCK2Q92563 424 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 ACSF2Q96CM8 615 aaPredicted RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 PAIP2Q9BPZ3 127 aaKnown RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 TRABDQ9H4I3 376 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 UBN1Q9NPG3 1134 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 FBXO40Q9UH90 709 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 ZNF214Q9UL59 606 aaPredicted RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 GRID1Q9ULK0 1009 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 L3MBTL1Q9Y468 752 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 hCG_1818297A0A087WSY0 165 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 F8VP50 259 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 POC1B-GALNT4F8VUJ3 575 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 MAGEB2O15479 319 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 OATP04181 439 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 PTPN7P35236 360 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 ARL2P36404 184 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 VCPP55072 806 aaKnown RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 PKN2Q16513 984 aaKnown RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 RNASEH2BQ5TBB1 312 aaKnown RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 LRRC38Q5VT99 294 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 SLFN12LQ6IEE8 588 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 DEPTORQ8TB45 409 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 HAUS1Q96CS2 278 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 CDHR1Q96JP9 859 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 PITPNM3Q9BZ71 974 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 DHX33Q9H6R0 707 aaKnown RBP12.31□□□□□ -0.44
LINC01001-201ENST00000526704 CYP39A1Q9NYL5 469 aa12.31□□□□□ -0.44
LINC01001-201ENST00000526704 K7ERI5 159 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 LDHAP00338 332 aaKnown RBP12.3□□□□□ -0.44
LINC01001-201ENST00000526704 CALB1P05937 261 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 KCNA3P22001 575 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 SKIV2L2P42285 1042 aaKnown RBP12.3□□□□□ -0.44
LINC01001-201ENST00000526704 TGFB2P61812 414 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 MORF4L2Q15014 288 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 ZFYVE27Q5T4F4 411 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 DRG1Q9Y295 367 aaKnown RBP12.3□□□□□ -0.44
LINC01001-201ENST00000526704 STARD13Q9Y3M8 1113 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 A0A0G2JMZ2 1700 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 LRRC37A2A6NM11 1700 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 HARSP12081 509 aaKnown RBP12.3□□□□□ -0.44
LINC01001-201ENST00000526704 BRD2P25440 801 aaKnown RBP12.3□□□□□ -0.44
LINC01001-201ENST00000526704 MSH2P43246 934 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 BACE1P56817 501 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 DNAJC3Q13217 504 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 MOGSQ13724 837 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 TMEM132BQ14DG7 1078 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 WDR72Q3MJ13 1102 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 DNAJC24Q6P3W2 148 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms