RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 E7ENX8 843 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 SMIM22K7EJ46 135 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 BRINP1O60477 761 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 SLC43A1O75387 559 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 TUBB4AP04350 444 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 ZFXP17010 805 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 NDUFB7P17568 137 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 CCKARP32238 428 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 ZNF134P52741 427 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 TAP2Q03519 686 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 TUBB3Q13509 450 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 LAMB3Q13751 1172 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 BMPR2Q13873 1038 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 FLYWCH1Q4VC44 716 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 PLAC9Q5JTB6 97 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 PRAMEF17Q5VTA0 474 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 CEP85Q6P2H3 762 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 FAM9AQ8IZU1 332 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 TMIEQ8NEW7 156 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 SMOQ99835 787 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 EBF3Q9H4W6 596 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 SERTAD4Q9NUC0 356 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 TDP1Q9NUW8 608 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 EHD3Q9NZN3 535 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 GPR45Q9Y5Y3 372 aa3.77□□□□□ -1.81
ECHDC1-219ENST00000526299 SMIM35A0A1B0GVV1 85 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 PRR23D1E9PI22 279 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 POLRMTO00411 1230 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 TRIAP1O43715 76 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 JTBO76095 146 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 PRR23D2P0DMB1 279 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 JUPP14923 745 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 PCSK6P29122 969 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 ARHGAP25P42331 645 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 ZNF280AP59817 542 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 POU6F2P78424 691 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 TMPRSS15P98073 1019 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 TARDBPQ13148 414 aaKnown RBP eCLIP3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 TBCCQ15814 346 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 TAPT1Q6NXT6 567 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 JAZF1Q86VZ6 243 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 AOPEPQ8N6M6 819 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 FANCBQ8NB91 859 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 POC1BQ8TC44 478 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 SSH1Q8WYL5 1049 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 FKBP10Q96AY3 582 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 ALG8Q9BVK2 526 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 PRSS22Q9GZN4 317 aa3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 TUBA8Q9NY65 449 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-219ENST00000526299 IGKV2D-30A0A075B6S6 120 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 PRRT4C9JH25 899 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 ZNF213O14771 459 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 LINC00205P59089 165 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 STAT4Q14765 748 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 LRRC41Q15345 812 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 MIDNQ504T8 468 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 ZNF551Q7Z340 670 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 KRT73Q86Y46 540 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 CNGA4Q8IV77 575 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 IFI44Q8TCB0 444 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 ACTRT3Q9BYD9 372 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 ARHGEF3Q9NR81 526 aa3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-219ENST00000526299 SPATA31A3Q5VYP0 1347 aa3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 PRKD3O94806 890 aa3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 AGXTP21549 392 aa3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 ALDH9A1P49189 494 aa3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 NDUFV1P49821 464 aa3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 CDC42EP1Q00587 391 aa3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 CLUL1Q15846 466 aa3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 ZNF365Q70YC5 407 aa3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 SMOC2Q9H3U7 446 aa3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 CAAP1Q9H8G2 361 aa3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 SAP30BPQ9UHR5 308 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-219ENST00000526299 E9PLN8 166 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 MYO1FO00160 1098 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 DNAJB5O75953 348 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 LPOP22079 712 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 SOX5P35711 763 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 PLCD1P51178 756 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 CT47A1Q5JQC4 288 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 PXDC1Q5TGL8 231 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 GADL1Q6ZQY3 521 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 LHFPL2Q6ZUX7 228 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 MEPCEQ7L2J0 689 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 MIGA2Q7L4E1 593 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 SLC29A4Q7RTT9 530 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 SMRP1Q8NCR6 262 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 CLPTM1LQ96KA5 538 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 VKORC1Q9BQB6 163 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 TMEM79Q9BSE2 394 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 PDGFCQ9NRA1 345 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 WWOXQ9NZC7 414 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 AFG3L2Q9Y4W6 797 aa3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.73□□□□□ -1.81
ECHDC1-219ENST00000526299 WASHC2AQ641Q2 1341 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 MYMKA6NI61 221 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 ADAMTS3O15072 1205 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 VPS4BO75351 444 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms