RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 NXF1Q9UBU9 619 aaKnown RBP13.87□□□□□ -0.19
SMPD1-202ENST00000526280 COG5Q9UP83 839 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 TSC2P49815 1807 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 GOLGA6L3A6NEY3 463 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 GABRDO14764 452 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 P4HA2O15460 535 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 N4BP1O75113 896 aaKnown RBP13.86□□□□□ -0.19
SMPD1-202ENST00000526280 LRRN2O75325 713 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 TBX10O75333 385 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 TACC1O75410 805 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 ABLIM3O94929 683 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 AFPP02771 609 aaKnown RBP13.86□□□□□ -0.19
SMPD1-202ENST00000526280 SRGAP2BP0DMP2 458 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 LHX1P48742 406 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 ROR1Q01973 937 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 MYL5Q02045 173 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 DLX2Q07687 328 aaPredicted RBP13.86□□□□□ -0.19
SMPD1-202ENST00000526280 SPOPLQ6IQ16 392 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 EP400NLQ6ZTU2 488 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 OSTM1Q86WC4 334 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 ADGRF2Q8IZF7 708 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 OR10T2Q8NGX3 314 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 ZNF461Q8TAF7 563 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 HDAC7Q8WUI4 952 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 KBTBD7Q8WVZ9 684 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 CASP10Q92851 521 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 IMPG2Q9BZV3 1241 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 APOBEC3GQ9HC16 384 aaKnown RBP13.86□□□□□ -0.19
SMPD1-202ENST00000526280 PRDM6Q9NQX0 595 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 FANCLQ9NW38 375 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 CLEC1BQ9P126 229 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 MAGEC2Q9UBF1 373 aaPredicted RBP13.86□□□□□ -0.19
SMPD1-202ENST00000526280 BARX2Q9UMQ3 279 aaPredicted RBP13.86□□□□□ -0.19
SMPD1-202ENST00000526280 POLIQ9UNA4 740 aa13.86□□□□□ -0.19
SMPD1-202ENST00000526280 SPTBN5Q9NRC6 3674 aaKnown RBP13.85□□□□□ -0.19
SMPD1-202ENST00000526280 WDR27A2RRH5 827 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 KCNJ18B7U540 433 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 SPATA31D3P0C874 917 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 P4HA1P13674 534 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 WARSP23381 471 aaKnown RBP13.85□□□□□ -0.19
SMPD1-202ENST00000526280 MTIF2P46199 727 aaKnown RBP13.85□□□□□ -0.19
SMPD1-202ENST00000526280 ARPP19P56211 112 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 NOP14P78316 857 aaKnown RBP13.85□□□□□ -0.19
SMPD1-202ENST00000526280 MYL7Q01449 175 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 KCNJ12Q14500 433 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 NCAPHQ15003 741 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 HSP90AA4PQ58FG1 418 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 TCP11X2Q5H9J9 407 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 CDKAL1Q5VV42 579 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 TPGS2Q68CL5 300 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 ANKRD54Q6NXT1 300 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 SPATA31D4Q6ZUB0 917 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 KREMEN2Q8NCW0 462 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 CCDC150Q8NCX0 1101 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 FAXDC2Q96IV6 333 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 MSLNLQ96KJ4 702 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 TMEM209Q96SK2 561 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 ACBD6Q9BR61 282 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 MRPL45Q9BRJ2 306 aaKnown RBP13.85□□□□□ -0.19
SMPD1-202ENST00000526280 PLEKHA4Q9H4M7 779 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 SMYD3Q9H7B4 428 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMPD1-202ENST00000526280 DDX43Q9NXZ2 648 aaKnown RBP13.85□□□□□ -0.19
SMPD1-202ENST00000526280 DPP7Q9UHL4 492 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 FBXW11Q9UKB1 542 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 PLXNA3P51805 1871 aa13.85□□□□□ -0.19
SMPD1-202ENST00000526280 A0A0C4DFX4 3053 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 MTCL1Q9Y4B5 1905 aaKnown RBP13.84□□□□□ -0.19
SMPD1-202ENST00000526280 XIRP2A4UGR9 3374 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 CLSTN1O94985 981 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 OR4Q2P0C623 313 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 ATF2P15336 505 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 HOXB8P17481 243 aaPredicted RBP13.84□□□□□ -0.19
SMPD1-202ENST00000526280 KCNA5P22460 613 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 LMO2P25791 158 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 EEF1GP26641 437 aaKnown RBP13.84□□□□□ -0.19
SMPD1-202ENST00000526280 GNL1P36915 607 aaPredicted RBP13.84□□□□□ -0.19
SMPD1-202ENST00000526280 ASPAP45381 313 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 ZNF165P49910 485 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 CDH8P55286 799 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 CETN1Q12798 172 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 GPR17Q13304 367 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 MAN2A1Q16706 1144 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 WDR44Q5JSH3 913 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 SYCE2Q6PIF2 218 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 AOPEPQ8N6M6 819 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 LMO3Q8TAP4 145 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 TUBGCP2Q9BSJ2 902 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 BCO2Q9BYV7 579 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 NIF3L1Q9GZT8 377 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 ZCWPW1Q9H0M4 648 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 SNX25Q9H3E2 840 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 MAN1C1Q9NR34 630 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 DZANK1Q9NVP4 752 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 AFF4Q9UHB7 1163 aaKnown RBP13.84□□□□□ -0.19
SMPD1-202ENST00000526280 MAFFQ9ULX9 164 aa13.84□□□□□ -0.19
SMPD1-202ENST00000526280 SMTNL1A8MU46 457 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 H3BQ06 376 aaPredicted RBP13.83□□□□□ -0.2
SMPD1-202ENST00000526280 CPB1P15086 417 aa13.83□□□□□ -0.2
SMPD1-202ENST00000526280 ZNF18P17022 549 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms