RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 NFXL1Q6ZNB6 911 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 CCDC73Q6ZRK6 1079 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 ARHGAP22Q7Z5H3 698 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 APBB1IPQ7Z5R6 666 aaPredicted RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 RBM23Q86U06 439 aaKnown RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 DBF4BQ8NFT6 615 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 BCAS4Q8TDM0 211 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 SEPT8Q92599 483 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 GFM2Q969S9 779 aaKnown RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 DYNLL2Q96FJ2 89 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 PLEKHG4BQ96PX9 1271 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 RUFY1Q96T51 708 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 RTP3Q9BQQ7 232 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 POLR3CQ9BUI4 534 aaPredicted RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 CARD6Q9BX69 1037 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 CAPS2Q9BXY5 557 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 VCX3BQ9H321 246 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 RABEP2Q9H5N1 569 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 DCTPP1Q9H773 170 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 TLE6Q9H808 572 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 MKNK2Q9HBH9 465 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 VCX3AQ9NNX9 186 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 TRPV5Q9NQA5 729 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 PIH1D3Q9NQM4 214 aaKnown RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 CLEC1BQ9P126 229 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 NCDNQ9UBB6 729 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 CTNNAL1Q9UBT7 734 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.44□□□□□ -1.54
CD44-218ENST00000525469 BARX2Q9UMQ3 279 aaPredicted RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 PCDHA4Q9UN74 947 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 CHD6Q8TD26 2715 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 LCTP09848 1927 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 KIAA1217Q5T5P2 1943 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CTAGE15A4D2H0 777 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 GOLGA6CA6NDK9 693 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CFAP73A6NFT4 308 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 PRR5-ARHGAP8B1AHC4 643 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 RSPH10B2B2RC85 870 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 B4DLN1 442 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 E7ENQ6 273 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 F5H6K3 240 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 NDUFAB1O14561 156 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 IKBKBO14920 756 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 RASSF9O75901 435 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 ADRB1P08588 477 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 GSTA2P09210 222 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 RSPH10BP0C881 870 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 GOLGA6DP0CG33 693 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CTAGE8P0CG41 777 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 TXNP10599 105 aaKnown RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 CYP2D6P10635 497 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 GHRP10912 638 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 EPB41P11171 864 aaKnown RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 VDRP11473 427 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 IDO1P14902 403 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 THPOP40225 353 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CDK8P49336 464 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 RAB27AP51159 221 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 MRPS35P82673 323 aaKnown RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 ARHGAP8P85298 464 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 KLRC3Q07444 240 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 ACTN3Q08043 901 aaPredicted RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 CDK5R2Q13319 367 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 BTG3Q14201 252 aaPredicted RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 CCDC92Q53HC0 331 aaPredicted RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 CCDC178Q5BJE1 867 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 ALS2CLQ60I27 953 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CWF19L1Q69YN2 538 aaKnown RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 TTC19Q6DKK2 380 aaPredicted RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 KCNV1Q6PIU1 500 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CCDC121Q6ZUS5 278 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CACNA2D4Q7Z3S7 1137 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CTAGE6Q86UF2 777 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CEP57Q86XR8 500 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CTAGE4Q8IX94 777 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 TP53INP2Q8IXH6 220 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CCDC105Q8IYK2 499 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 LRRC47Q8N1G4 583 aaKnown RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 DCLK2Q8N568 766 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 DTWD2Q8NBA8 298 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 STK35Q8TDR2 534 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CHURC1Q8WUH1 139 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 DYDC1Q8WWB3 177 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.43□□□□□ -1.54
CD44-218ENST00000525469 DHX38Q92620 1227 aaKnown RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 ISL2Q96A47 359 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 TBC1D31Q96DN5 1066 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CCDC114Q96M63 670 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 TTC14Q96N46 770 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 NEK1Q96PY6 1258 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 TSC22D3Q99576 134 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 RTKNQ9BST9 563 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 ALG1Q9BT22 464 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 CCDC28BQ9BUN5 200 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 KATNAL1Q9BW62 490 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 TM6SF1Q9BZW5 370 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 VCXQ9H320 206 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 METTL14Q9HCE5 456 aaKnown RBP5.43□□□□□ -1.54
CD44-218ENST00000525469 CACNA2D2Q9NY47 1150 aa5.43□□□□□ -1.54
CD44-218ENST00000525469 GOLGA6AQ9NYA3 693 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms