RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 MAGEA4P43358 317 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 PSMD7P51665 324 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 EMP3P54852 163 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 SULT2A1Q06520 285 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 RASA2Q15283 850 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 GRAMD1BQ3KR37 738 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 POTEEQ6S8J3 1075 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 FRMD5Q7Z6J6 570 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 ULK2Q8IYT8 1036 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 RDH13Q8NBN7 331 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 RIN3Q8TB24 985 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 CCDC28BQ9BUN5 200 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 TRAIPQ9BWF2 469 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 SLC17A7Q9P2U7 560 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 APPL1Q9UKG1 709 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 HEY1Q9Y5J3 304 aa11.86□□□□□ -0.51
CLNS1A-204ENST00000525428 SFI1A8K8P3 1242 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 FOXN3O00409 490 aaPredicted RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 TRIM49P0CI25 452 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 TRIM49CP0CI26 452 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 GCAP28676 217 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 MTTPP55157 894 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 MAP7D1Q3KQU3 841 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 IZUMO3Q5VZ72 239 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 ZNF804AQ7Z570 1209 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 SLC15A3Q8IY34 581 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 SLC44A5Q8NCS7 719 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 COA7Q96BR5 231 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 NSUN4Q96CB9 384 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 MKNK2Q9HBH9 465 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 DCP1AQ9NPI6 582 aaPredicted RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 ACTL7BQ9Y614 415 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 BAZ2AQ9UIF9 1905 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 C15orf38-AP3S2A0A0A6YYH1 394 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 ATP9BO43861 1147 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 SORBS2O94875 1100 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 NR3C1P04150 777 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 TFPTP0C1Z6 253 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 UQCRBP14927 111 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 SERPINB8P50452 374 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 SCNN1DP51172 638 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 CHN2P52757 468 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 MSLNQ13421 630 aaPredicted RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 TRIP10Q15642 601 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 AOC3Q16853 763 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 MFSD14BQ5SR56 506 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 PCNX4Q63HM2 1172 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 CC2D2BQ6DHV5 1058 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 FBXL19Q6PCT2 694 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 IYDQ6PHW0 289 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 GSTA5Q7RTV2 222 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 ARPINQ7Z6K5 226 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 DZIP1Q86YF9 867 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 PDSS2Q86YH6 399 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 RHOT2Q8IXI1 618 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 METTL25Q8N6Q8 603 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 PIGSQ96S52 555 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 TSSK1BQ9BXA7 367 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 BRD8Q9H0E9 1235 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 PCDHAC2Q9Y5I4 1007 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 BUD23O43709 281 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 TFAP2AP05549 437 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 KITP10721 976 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 ZFXP17010 805 aaPredicted RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 SERPINB6P35237 376 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 EPHB1P54762 984 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 ARL4CP56559 192 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 NAA20P61599 178 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 PLCB3Q01970 1234 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 PPIDQ08752 370 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 CYP1B1Q16678 543 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 KNOP1Q1ED39 458 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 SFR1Q86XK3 245 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 GDPD5Q8WTR4 605 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 MANSC1Q9H8J5 431 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 TYW1Q9NV66 732 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 PPARGC1AQ9UBK2 798 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 NEU2Q9Y3R4 380 aa11.85□□□□□ -0.51
CLNS1A-204ENST00000525428 CASZ1Q86V15 1759 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 TMEM247A6NEH6 219 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 BANF1O75531 89 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 TCEA3O75764 348 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 HOXD13P35453 343 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 STAT3P40763 770 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 ACTR3P61158 418 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 NOP14P78316 857 aaKnown RBP11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 IGBP1P78318 339 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 CDK16Q00536 496 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 GRM4Q14833 912 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 EDRF1Q3B7T1 1238 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 TMEM119Q4V9L6 283 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 TMEM53Q6P2H8 277 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 NLRX1Q86UT6 975 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 EFCAB3Q8N7B9 438 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 TCP10LQ8TDR4 215 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 PRICKLE1Q96MT3 831 aaPredicted RBP11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 HERPUD2Q9BSE4 406 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 UNC45AQ9H3U1 944 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms